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fix tests

fix tests #630

Workflow file for this run

name: CI
on:
push:
branches:
- 'devel*'
pull_request:
branches:
- 'devel*'
jobs:
linting:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 2
- uses: actions/setup-python@v4
with:
python-version: 3.7
- name: Install dependencies
run: |
python -m venv testenv
. testenv/bin/activate
python -m pip install --upgrade pip setuptools wheel
python -m pip install -r requirements-ci.txt
- name: Lint with flake8 and pylint
run: |
. testenv/bin/activate
LOG=`git log -n 1 | grep Merge` || echo 'no merging' && exit 0
NEW=`echo $LOG | cut -d ' ' -f2`
OLD=`echo $LOG | cut -d ' ' -f3`
(test -z "$NEW" || test -z "$OLD") && echo 'nothing to lint' && exit 0
DIFF=`git diff --name-only --diff-filter=db $NEW..$OLD`
FILTERED=$(for f in $DIFF; do echo $f; done | \
grep -v -e 'concepts/' -e '/archive/' | \
grep -e '\.py$' | sed "s|^|$PWD/|")
test -z "$FILTERED" && echo 'nothing to lint' && exit 0
flake8 $FILTERED
pylint $FILTERED
tests:
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ ubuntu-latest ]
python-version: [ '3.7', '3.8', '3.9', '3.10', '3.11' ]
include:
- os: ubuntu-20.04
python-version: '3.6'
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 2
- uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m venv testenv
. testenv/bin/activate
python -m pip install --upgrade pip setuptools wheel
python -m pip install -r requirements-ci.txt
- name: Unit tests
run: |
. testenv/bin/activate
coverage run --source=radical.pilot -m pytest -ra -vvv --showlocals tests/unit_tests/ tests/component_tests/
coverage xml
- uses: codecov/codecov-action@v3
if: ${{ matrix.python-version == '3.7' }}
with:
files: ./coverage.xml
notebook_integration_test:
strategy:
matrix:
python-version: [ '3.7', '3.8', '3.9', '3.10', '3.11' ]
uses: ./.github/workflows/run-rp-notebook.yml
with:
python-version: ${{ matrix.python-version }}
requirements-file: 'requirements-docs-ci.txt'
notebook-name: 'getting_started.ipynb'
analytics:
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ ubuntu-latest ]
python-version: [ '3.7', '3.8', '3.9', '3.10', '3.11' ]
include:
- os: ubuntu-20.04
python-version: '3.6'
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 2
- uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
sudo apt update
sudo apt install -y texlive cm-super
sudo apt install -y texlive-fonts-extra texlive-extra-utils dvipng
sudo apt install -y texlive-fonts-recommended texlive-latex-extra
python -m venv testenv
. testenv/bin/activate
python -m pip install --upgrade pip setuptools wheel
python -m pip install -r requirements-ci.txt
- name: analyze example session
timeout-minutes: 5
run: |
. testenv/bin/activate
./examples/00_getting_started.py local.localhost
SID=$(ls -rt | grep rp.session)
echo "$SID: $SID"
radical-analytics-inspect "$SID"
mkdir artifacts
ls -la
cp -R *.png *.stats artifacts
- name: upload artifacts
uses: actions/upload-artifact@v3
with:
name: artifacts
path: artifacts