Open
Description
openedon Nov 11, 2024
Bug description
I recently updated to quarto version 1.5.57 from 1.5.35. After updating, quarto inspect is no longer able to find a document file in a subdirectory. Ironically, quarto render works fine. I could bisect that this problem appeard between v1.5.51 and v1.5.57. I assume this commit is the culprit.
Please see this MR as a reference where the issue appeared first.
Steps to reproduce
Create these files:
Main file:
---
title: main
format:
html:
default
---
{{< include "subdir/text2.qmd" >}}Text 2 (in ./subdir/):
# Second File
Some text here.
{{< include "subdir/b/text3.qmd" >}}Text 3 (in ./subdir/b/):
# Third File
Some text here.Now, run quarto inspect.
Expected behavior
quarto inspect outputs the desired information.
Actual behavior
quarto inspect fails with the following message:
ERROR: NotFound: No such file or directory (os error 2): readfile '/home/***/tmp/tarche-test/subdir/subdir/b/text3.qmd'
Path: /home/***/tmp/tarche-test/subdir/subdir/b/text3.qmd
Stack trace:
Path: /home/***/tmp/tarche-test/subdir/subdir/b/text3.qmd
at readTextFileSync (ext:deno_fs/30_fs.js:859:10)
at Object.Deno.readTextFileSync (file:///tmp/.mount_quartodxyAMD/usr/bin/quarto.js:5047:25)
at mappedStringFromFile (file:///tmp/.mount_quartodxyAMD/usr/bin/quarto.js:19592:24)
at Object.markdownForFile (file:///tmp/.mount_quartodxyAMD/usr/bin/quarto.js:40863:32)
at mdForFile (file:///tmp/.mount_quartodxyAMD/usr/bin/quarto.js:40283:29)
at inner (file:///tmp/.mount_quartodxyAMD/usr/bin/quarto.js:40322:67)
at inner (file:///tmp/.mount_quartodxyAMD/usr/bin/quarto.js:40322:23)
at async projectResolveCodeCellsForFile (file:///tmp/.mount_quartodxyAMD/usr/bin/quarto.js:40342:5)
at async inspectConfig (file:///tmp/.mount_quartodxyAMD/usr/bin/quarto.js:101478:13)
at async Command.actionHandler (file:///tmp/.mount_quartodxyAMD/usr/bin/quarto.js:101515:20)
quarto render runs fine. Even after removing the subdir in the include of text3.qmd, the command fails.
Your environment
- OS: Linux
Quarto check output
Quarto 1.5.57
[✓] Checking versions of quarto binary dependencies...
Pandoc version 3.2.0: OK
Dart Sass version 1.70.0: OK
Deno version 1.41.0: OK
Typst version 0.11.0: OK
[✓] Checking versions of quarto dependencies......OK
[✓] Checking Quarto installation......OK
Version: 1.5.57
Path: /tmp/.mount_quartoWCrNeu/usr/bin
[✓] Checking tools....................OK
TinyTeX: (not installed)
Chromium: (not installed)
[✓] Checking LaTeX....................OK
Using: Installation From Path
Path: /usr/bin
Version: 2023
[✓] Checking basic markdown render....OK
[✓] Checking Python 3 installation....OK
Version: 3.12.7
Path: /usr/bin/python3
Jupyter: (None)
Jupyter is not available in this Python installation.
Install with python3 -m pip install jupyter
[✓] Checking R installation...........OK
Version: 4.4.1
Path: /usr/lib64/R
LibPaths:
- /home/***/.local/share/R/R.library
- /usr/lib64/R/library
- /usr/share/R/library
knitr: 1.48
rmarkdown: 2.26
[✓] Checking Knitr engine render......OK
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