The microscope.ipynb file, when ran gives the following error
AttributeError: np.complex_ was removed in the NumPy 2.0 release. Use np.complex128 instead.
Which arises when running the cell containing the code,
a = Analysis(s) #a.figures[0].axes[0].set_xlim(220, 253) #a.figures[0].axes[0].set_ylim(-7, 7) #a.figures[0].axes[0].set_xlim(-2, 52) #a.figures[0].set_figheight(10)
I guess an easy fix would be to use an older version of numpy. But try to fix this from your side