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Thanks for the great tutorial.
Everything runs well up until cl_markers %>% group_by(cluster) %>% top_n(n = 2, wt = avg_logFC)
cl_markers %>% group_by(cluster) %>% top_n(n = 2, wt = avg_logFC)
I think something may have changed such that it should have wt = avg_log2FC, which runs fine.
wt = avg_log2FC