Skip to content

Multiple inputs add default workflow #3371

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
merged 13 commits into from
Feb 24, 2024
Merged

Multiple inputs add default workflow #3371

Changes from 1 commit
Commits
Show all changes
13 commits
Select commit Hold shift + click to select a range
8fc57f4
add rna_copy_counts
antgonza Feb 8, 2024
0599c18
RNA -> Calculate RNA
antgonza Feb 8, 2024
753a507
v != '*'
antgonza Feb 16, 2024
b2ac1f7
v != '*' : fix conditional
antgonza Feb 16, 2024
a2ef905
prep job only display if success
antgonza Feb 16, 2024
ff33546
allowing for multiple inputs in workflow
antgonza Feb 19, 2024
b4f3201
fix error
antgonza Feb 19, 2024
2ef9604
just one element
antgonza Feb 20, 2024
f063ca0
rollback add_default_workflow
antgonza Feb 20, 2024
94fa00b
Merge branch 'dev' of github.com:biocore/qiita into multiple-inputs-a…
antgonza Feb 20, 2024
1e483a7
add full workflow case
antgonza Feb 23, 2024
f1a6945
do not add ancestors
antgonza Feb 23, 2024
4223a88
single command
antgonza Feb 23, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
Prev Previous commit
Next Next commit
just one element
  • Loading branch information
@antgonza
antgonza committed Feb 20, 2024
commit 2ef9604677f0650476307d62e1a46c0b3daddeac
3 changes: 2 additions & 1 deletion qiita_db/metadata_template/prep_template.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -917,7 +917,8 @@ def _get_predecessors(workflow, node):
predecessors = _get_predecessors(wk, node)
cmds_to_create = []
init_artifacts = None
for i, (pnodes, cnode, cxns) in enumerate(predecessors):
# we only need to "loop" over the first element
for pnodes, cnode, cxns in predecessors[:1]:
cdp = cnode.default_parameter
cdp_cmd = cdp.command
params = cdp.values.copy()
Expand Down