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This line assumes that the call pt.ebi_experiment_accessions returns None (or an empty dict) if the prep information is not in EBI. However, pt.ebi_experiment_accessions returns a dict in which the key is the sample ids and the values are None if it has not been submitted to EBI.

Since the EBI experiment accessions are not shown in the interface, it is enough to ask directly to the template if it has been submitted or not.

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Coverage increased (+0.02%) to 83.023% when pulling 2886d77 on josenavas:fix-ebi-prep into b923147 on biocore:master.

@antgonza antgonza merged commit 2c814e3 into qiita-spots:master Apr 25, 2016
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3 participants