revise the idea of the demux file

[antgonza]

Adding an issue for this. Currently we have raw reads (barcode, forward, & [optional] reverse), demux, and per_sample_FASTQs in the system and it might be nice due to size and speed to always create the demux file and perhaps discard the other file formats.

[ackermag]

Does that not imply that they won't be available for download?

…

On Sun, Oct 28, 2018 at 5:44 AM Antonio Gonzalez ***@***.***> wrote: Adding an issue for this. Currently we have raw reads (barcode, forward, & [optional] reverse), demux, and per_sample_FASTQs in the system and it might be nice due to size and speed to always create the demux file and perhaps discard the other file formats. — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#2719>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AB69gMQzPB-UGuHx6HkBJGCfYNgDCw3iks5upaa8gaJpZM4X98bW> .

-- Gail Ackermann Knight Lab UCSD glackermann@ucsd.edu <ackermag@ucsd.edu>

[antgonza]

In short: It will depend on how is implemented ...

[antgonza]

Duplicate of #2934