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Couldn't load subscription status.
- Fork 79
Closed
Milestone
Description
It will raise the following error, but it won't be visible through the graphical user interface, the insdc status will still appear as 'submitting'.
Traceback (most recent call last):
File "/home/qiita/qiita_main/scripts/qiita", line 486, in <module>
qiita()
File "/home/qiita/.virtualenvs/qiita/lib/python2.7/site-packages/click/core.py", line 664, in __call__
return self.main(*args, **kwargs)
File "/home/qiita/.virtualenvs/qiita/lib/python2.7/site-packages/click/core.py", line 644, in main
rv = self.invoke(ctx)
File "/home/qiita/.virtualenvs/qiita/lib/python2.7/site-packages/click/core.py", line 991, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/home/qiita/.virtualenvs/qiita/lib/python2.7/site-packages/click/core.py", line 991, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/home/qiita/.virtualenvs/qiita/lib/python2.7/site-packages/click/core.py", line 991, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/home/qiita/.virtualenvs/qiita/lib/python2.7/site-packages/click/core.py", line 837, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/home/qiita/.virtualenvs/qiita/lib/python2.7/site-packages/click/core.py", line 464, in invoke
return callback(*args, **kwargs)
File "/home/qiita/qiita_main/scripts/qiita", line 362, in submit
_submit_EBI(preprocessed_data_id, action, send, fastq_dir)
File "/home/qiita/qiita_main/qiita_ware/commands.py", line 146, in submit_EBI
submission_fp, action)
File "/home/qiita/qiita_main/qiita_ware/ebi.py", line 784, in write_all_xml_files
self.write_experiment_xml(experiment_fp)
File "/home/qiita/qiita_main/qiita_ware/ebi.py", line 725, in write_experiment_xml
'experiment_xml_fp', fp)
File "/home/qiita/qiita_main/qiita_ware/ebi.py", line 677, in _write_xml_file
xml = minidom.parseString(ET.tostring(xml_element))
File "/opt/python-2.7.3/lib/python2.7/xml/etree/ElementTree.py", line 1127, in tostring
ElementTree(element).write(file, encoding, method=method)
File "/opt/python-2.7.3/lib/python2.7/xml/etree/ElementTree.py", line 821, in write
serialize(write, self._root, encoding, qnames, namespaces)
File "/opt/python-2.7.3/lib/python2.7/xml/etree/ElementTree.py", line 940, in _serialize_xml
_serialize_xml(write, e, encoding, qnames, None)
File "/opt/python-2.7.3/lib/python2.7/xml/etree/ElementTree.py", line 940, in _serialize_xml
_serialize_xml(write, e, encoding, qnames, None)
File "/opt/python-2.7.3/lib/python2.7/xml/etree/ElementTree.py", line 940, in _serialize_xml
_serialize_xml(write, e, encoding, qnames, None)
File "/opt/python-2.7.3/lib/python2.7/xml/etree/ElementTree.py", line 940, in _serialize_xml
_serialize_xml(write, e, encoding, qnames, None)
File "/opt/python-2.7.3/lib/python2.7/xml/etree/ElementTree.py", line 938, in _serialize_xml
write(_escape_cdata(text, encoding))
File "/opt/python-2.7.3/lib/python2.7/xml/etree/ElementTree.py", line 1074, in _escape_cdata
return text.encode(encoding, "xmlcharrefreplace")
UnicodeDecodeError: 'ascii' codec can't decode byte 0xc3 in position 578: ordinal not in range(128)