Use SMC to initialize compartmental models #2452
Merged
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Addresses #2426
This replaces custom
.heuristic()
methods with a default genericSMCFilter
-based initialization strategy, greatly simplifying the process of creating new compartmental models. Users can still override this default.heuristic()
if needed.🎉 hooray for composable inference 🎉
Tested
python sir.py -p 10000 -d 60 -f 30 --verbose --plot
and confirmed good posteriors and mixing: