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Fix for #3180, plus improvements to sysinstall tests.

New command-line options:

* --mupdf-so-mode: Setting file mode for .so's passed to `install`.
* --packages: Whether to install required system packages.
* --pip: Whether to use venv's and/or install Python packages.

If pip is 'sudo' we use 'sudo pip install' to install packages required to
build MuPDF and PyMuPDF.
This uses `sudo pip install` to install required packages.
We need to use mupdf.pdf_array_push(), not mupdf.pdf_array_push_drop().

Addresses #3180.
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