Closed
Description
Describe the bug
A clear and concise description of what the bug is.
We are re-experiencing a similar (identical?) error to that mentioned in #280 and solved via bumping pip version on tox builds to >= 19.0 via Ouranosinc/xclim#315
This time again only 3.6 builds are failing. Python 3.7 and 3.8 build correctly
edit : typo
$ python --version
Python 3.6.7
$ pip --version
pip 19.0.3 from /home/travis/virtualenv/python3.6.7/lib/python3.6/site-packages/pip (python 3.6)
before_install.1
0.03s$ printenv
before_install.2
2.13s$ pip install --upgrade pip
install
2.23s$ pip install -U tox-travis
19.32s$ tox -e $TOXENV
GLOB sdist-make: /home/travis/build/Ouranosinc/xclim/setup.py
py36 create: /home/travis/build/Ouranosinc/xclim/.tox/py36
py36 installdeps: coveralls, pytest-cov, pip
py36 inst: /home/travis/build/Ouranosinc/xclim/.tox/.tmp/package/1/xclim-0.17.0.zip
ERROR: invocation failed (exit code 1), logfile: /home/travis/build/Ouranosinc/xclim/.tox/py36/log/py36-2.log
================================== log start ===================================
Processing ./.tox/.tmp/package/1/xclim-0.17.0.zip
Collecting numpy>=1.16 (from xclim==0.17.0)
Downloading https://files.pythonhosted.org/packages/03/27/e35e7c6e6a52fab9fcc64fc2b20c6b516eba930bb02b10ace3b38200d3ab/numpy-1.18.4-cp36-cp36m-manylinux1_x86_64.whl (20.2MB)
Collecting xarray>=0.14.1 (from xclim==0.17.0)
Downloading https://files.pythonhosted.org/packages/ee/11/fb2a8a6015e3de4ff19a4870bb0d11f48ebdd997062557d24cd076b3088f/xarray-0.15.1-py3-none-any.whl (668kB)
Collecting scipy>=1.2 (from xclim==0.17.0)
Downloading https://files.pythonhosted.org/packages/dc/29/162476fd44203116e7980cfbd9352eef9db37c49445d1fec35509022f6aa/scipy-1.4.1-cp36-cp36m-manylinux1_x86_64.whl (26.1MB)
Collecting numba (from xclim==0.17.0)
Downloading https://files.pythonhosted.org/packages/99/21/174fd222f4faa0f0732f629eb83533e51ecd474f373c4adf8b97724b83da/numba-0.49.1-cp36-cp36m-manylinux1_x86_64.whl (2.6MB)
Collecting pandas>=0.23 (from xclim==0.17.0)
Downloading https://files.pythonhosted.org/packages/bb/71/8f53bdbcbc67c912b888b40def255767e475402e9df64050019149b1a943/pandas-1.0.3-cp36-cp36m-manylinux1_x86_64.whl (10.0MB)
Collecting cftime>=1.0.4 (from xclim==0.17.0)
Downloading https://files.pythonhosted.org/packages/0f/5e/ee154e2aabb0beea0c4c7dc3d93c6f64f96a2a2019bbd05afc905439d042/cftime-1.1.3-cp36-cp36m-manylinux1_x86_64.whl (322kB)
Collecting netCDF4>=1.4 (from xclim==0.17.0)
Downloading https://files.pythonhosted.org/packages/35/4f/d49fe0c65dea4d2ebfdc602d3e3d2a45a172255c151f4497c43f6d94a5f6/netCDF4-1.5.3-cp36-cp36m-manylinux1_x86_64.whl (4.1MB)
Collecting fiona>=1.8 (from xclim==0.17.0)
Downloading https://files.pythonhosted.org/packages/ec/20/4e63bc5c6e62df889297b382c3ccd4a7a488b00946aaaf81a118158c6f09/Fiona-1.8.13.post1-cp36-cp36m-manylinux1_x86_64.whl (14.7MB)
Collecting geojson>=2.5.0 (from xclim==0.17.0)
Downloading https://files.pythonhosted.org/packages/e4/8d/9e28e9af95739e6d2d2f8d4bef0b3432da40b7c3588fbad4298c1be09e48/geojson-2.5.0-py2.py3-none-any.whl
Collecting shapely>=1.6 (from xclim==0.17.0)
Downloading https://files.pythonhosted.org/packages/20/fa/c96d3461fda99ed8e82ff0b219ac2c8384694b4e640a611a1a8390ecd415/Shapely-1.7.0-cp36-cp36m-manylinux1_x86_64.whl (1.8MB)
Collecting geopandas>=0.7 (from xclim==0.17.0)
Downloading https://files.pythonhosted.org/packages/83/c5/3cf9cdc39a6f2552922f79915f36b45a95b71fd343cfc51170a5b6ddb6e8/geopandas-0.7.0-py2.py3-none-any.whl (928kB)
Collecting dask[complete]>=2.6 (from xclim==0.17.0)
Downloading https://files.pythonhosted.org/packages/2a/00/1d9d5a0a6e9b500dd82b280298966db03d32f133bba7805a8a459ef486b6/dask-2.16.0-py3-none-any.whl (802kB)
Collecting pyproj>=2.5 (from xclim==0.17.0)
Downloading https://files.pythonhosted.org/packages/1a/40/772067a7532f3dc745caf5c0fddba667fc7eef3eccbd7963d34fa59feaa6/pyproj-2.6.1.post1-cp36-cp36m-manylinux1_x86_64.whl (10.9MB)
Collecting pint>=0.9 (from xclim==0.17.0)
Downloading https://files.pythonhosted.org/packages/9d/db/7a2204b03c22069839958df5723eb2718d50c33052e0da84c9a83de14ea4/Pint-0.11-py2.py3-none-any.whl (186kB)
Collecting bottleneck~=1.3.1 (from xclim==0.17.0)
Downloading https://files.pythonhosted.org/packages/5b/08/278c6ee569458e168096f6b51019cc1c81c288da3d1026a22ee2ccead102/Bottleneck-1.3.2.tar.gz (88kB)
Installing build dependencies: started
Installing build dependencies: finished with status 'error'
Complete output from command /home/travis/build/Ouranosinc/xclim/.tox/py36/bin/python -m pip install --ignore-installed --no-user --prefix /tmp/pip-build-env-cx8f5kk2 https://files.pythonhosted.org/packages/2c/c5/0d38afb961f83e0d51f319f7dc166195ebabc1ea3cb20a10a77f500f7156/setuptools-46.4.0-py3-none-any.whl#sha256=d05c2c47bbef97fd58632b63dd2b83426db38af18f65c180b2423fea4b67e6b8 https://files.pythonhosted.org/packages/8c/23/848298cccf8e40f5bbb59009b32848a4c38f4e7f3364297ab3c3e2e2cd14/wheel-0.34.2-py2.py3-none-any.whl#sha256=df277cb51e61359aba502208d680f90c0493adec6f0e848af94948778aed386e https://files.pythonhosted.org/packages/57/a7/e3e6bd9d595125e1abbe162e323fd2d06f6f6683185294b79cd2cdb190d5/numpy-1.13.3-cp36-cp36m-manylinux1_x86_64.whl#sha256=e8e0e75db757e41463888939d26c8058b4ecd25e563c597e9119f512dc0ee1da https://files.pythonhosted.org/packages/57/a7/e3e6bd9d595125e1abbe162e323fd2d06f6f6683185294b79cd2cdb190d5/numpy-1.13.3-cp36-cp36m-manylinux1_x86_64.whl#sha256=e8e0e75db757e41463888939d26c8058b4ecd25e563c597e9119f512dc0ee1da https://files.pythonhosted.org/packages/57/a7/e3e6bd9d595125e1abbe162e323fd2d06f6f6683185294b79cd2cdb190d5/numpy-1.13.3-cp36-cp36m-manylinux1_x86_64.whl#sha256=e8e0e75db757e41463888939d26c8058b4ecd25e563c597e9119f512dc0ee1da https://files.pythonhosted.org/packages/68/1e/116ad560de97694e2d0c1843a7a0075cc9f49e922454d32f49a80eb6f1f2/numpy-1.14.5-cp36-cp36m-manylinux1_x86_64.whl#sha256=8622db292b766719810e0cb0f62ef6141e15fe32b04e4eb2959888319e59336b https://files.pythonhosted.org/packages/0e/46/ae6773894f7eacf53308086287897ec568eac9768918d913d5b9d366c5db/numpy-1.17.3-cp36-cp36m-manylinux1_x86_64.whl#sha256=4f2a2b279efde194877aff1f76cf61c68e840db242a5c7169f1ff0fd59a2b1e2 https://files.pythonhosted.org/packages/7b/74/54c5f9bb9bd4dae27a61ec1b39076a39d359b3fb7ba15da79ef23858a9d8/numpy-1.16.0-cp36-cp36m-manylinux1_x86_64.whl#sha256=2d279bd99329e72c30937bdef82b6dc7779c7607c5a379bab1bf76be1f4c1422 https://files.pythonhosted.org/packages/7b/74/54c5f9bb9bd4dae27a61ec1b39076a39d359b3fb7ba15da79ef23858a9d8/numpy-1.16.0-cp36-cp36m-manylinux1_x86_64.whl#sha256=2d279bd99329e72c30937bdef82b6dc7779c7607c5a379bab1bf76be1f4c1422 https://files.pythonhosted.org/packages/7b/74/54c5f9bb9bd4dae27a61ec1b39076a39d359b3fb7ba15da79ef23858a9d8/numpy-1.16.0-cp36-cp36m-manylinux1_x86_64.whl#sha256=2d279bd99329e72c30937bdef82b6dc7779c7607c5a379bab1bf76be1f4c1422 https://files.pythonhosted.org/packages/7b/74/54c5f9bb9bd4dae27a61ec1b39076a39d359b3fb7ba15da79ef23858a9d8/numpy-1.16.0-cp36-cp36m-manylinux1_x86_64.whl#sha256=2d279bd99329e72c30937bdef82b6dc7779c7607c5a379bab1bf76be1f4c1422 https://files.pythonhosted.org/packages/0e/46/ae6773894f7eacf53308086287897ec568eac9768918d913d5b9d366c5db/numpy-1.17.3-cp36-cp36m-manylinux1_x86_64.whl#sha256=4f2a2b279efde194877aff1f76cf61c68e840db242a5c7169f1ff0fd59a2b1e2:
Double requirement given: numpy==1.14.5 from https://files.pythonhosted.org/packages/68/1e/116ad560de97694e2d0c1843a7a0075cc9f49e922454d32f49a80eb6f1f2/numpy-1.14.5-cp36-cp36m-manylinux1_x86_64.whl#sha256=8622db292b766719810e0cb0f62ef6141e15fe32b04e4eb2959888319e59336b (already in numpy==1.13.3 from https://files.pythonhosted.org/packages/57/a7/e3e6bd9d595125e1abbe162e323fd2d06f6f6683185294b79cd2cdb190d5/numpy-1.13.3-cp36-cp36m-manylinux1_x86_64.whl#sha256=e8e0e75db757e41463888939d26c8058b4ecd25e563c597e9119f512dc0ee1da, name='numpy')