Add noopener to outgoing links for security

app/views/help/ancescon.scala.html

@@ -7,7 +7,7 @@
     </ul>
     <div id="tabs-1" class="greenlink">
         <p>ANCESCON is a package for distance-based phylogenetic inference and reconstruction of ancestral protein sequences that takes into account the observed variation of evolutionary rates between positions that more precisely describes the evolution of protein families.</p>
-        <p>[Reconstruction of ancestral protein sequences and its applications, Wei Cai, Jimin Pei, and Nick V Grishin<br/>BMC Evol Biol. 2004; 4: 33. doi: 10.1186/1471-2148-4-33. <a href = https://www.ncbi.nlm.nih.gov/pmc/articles/PMC522809 target="_blank">Published online 2004 September 17</a>.]</p>
+        <p>[Reconstruction of ancestral protein sequences and its applications, Wei Cai, Jimin Pei, and Nick V Grishin<br/>BMC Evol Biol. 2004; 4: 33. doi: 10.1186/1471-2148-4-33. <a href = https://www.ncbi.nlm.nih.gov/pmc/articles/PMC522809 target="_blank" rel="noopener">Published online 2004 September 17</a>.]</p>
     </div>
     <div id="tabs-2" class="greenlink">
         <ul class="accordion" data-accordion data-allow-all-closed='true'>
@@ -21,7 +21,7 @@
     </div>
     <div id="tabs-3" class="greenlink">
         @help.citations.toolkit_citation()
-        <p>Cai W., Pei J., Grishin NV. (2004) <b>Reconstruction of ancestral protein sequences and its applications. </b>BMC Evol Biol. 4:33. <a href = https://www.ncbi.nlm.nih.gov/pubmed/15377393 target="_blank">PMID: 15377393</a></p>
+        <p>Cai W., Pei J., Grishin NV. (2004) <b>Reconstruction of ancestral protein sequences and its applications. </b>BMC Evol Biol. 4:33. <a href = https://www.ncbi.nlm.nih.gov/pubmed/15377393 target="_blank" rel="noopener">PMID: 15377393</a></p>
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app/views/help/backtrans.scala.html

@@ -28,7 +28,7 @@
             <li class="accordion-item" data-accordion-item>
                 <a class="accordion-title">Genetic code</a>
                 <div class="accordion-content" data-tab-content>
-                    Select the correct genetic code for your organism. The genetic codes are identical to those available on the <a href = https://www.ncbi.nlm.nih.gov/taxonomy target="_blank">NCBI homepage</a>.
+                    Select the correct genetic code for your organism. The genetic codes are identical to those available on the <a href = https://www.ncbi.nlm.nih.gov/taxonomy target="_blank" rel="noopener">NCBI homepage</a>.
                 </div>
             </li>
             <li class="accordion-item" data-accordion-item>
@@ -40,14 +40,14 @@
             <li class="accordion-item" data-accordion-item>
                 <a class="accordion-title">Codon usage table of organism</a>
                 <div class="accordion-content" data-tab-content>
-                    Here you can search for a codon usage table of an organism. The codon usage database (identical to the one of <a href = http://www.kazusa.or.jp/codon target="_blank">http://www.kazusa.or.jp/codon/</a>) is based of the <a href = https://www.ncbi.nlm.nih.gov/genbank target="_blank">NCBI GenBank</a> (GenBank Release 160.0 [June 15 2007]). Please enter the name of the organism in the box.
+                    Here you can search for a codon usage table of an organism. The codon usage database (identical to the one of <a href = http://www.kazusa.or.jp/codon target="_blank" rel="noopener">http://www.kazusa.or.jp/codon/</a>) is based of the <a href = https://www.ncbi.nlm.nih.gov/genbank target="_blank" rel="noopener">NCBI GenBank</a> (GenBank Release 160.0 [June 15 2007]). Please enter the name of the organism in the box.
                 </div>
             </li>
         </ul>
     </div>
     <div id="tabs-3" class="greenlink">
         @help.citations.toolkit_citation()
-        <p>Nakamura Y., Gojobori T., Ikemura T. (2000) <b>Codon usage tabulated from international DNA sequence databases: status for the year 2000. </b>Nucleic Acids Res 28(1):292. <a href = https://www.ncbi.nlm.nih.gov/pubmed/10592250 target="_blank">PMID: 10592250</a></p>
+        <p>Nakamura Y., Gojobori T., Ikemura T. (2000) <b>Codon usage tabulated from international DNA sequence databases: status for the year 2000. </b>Nucleic Acids Res 28(1):292. <a href = https://www.ncbi.nlm.nih.gov/pubmed/10592250 target="_blank" rel="noopener">PMID: 10592250</a></p>
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app/views/help/citations/toolkit_citation.scala.html

@@ -1 +1 @@
-<p>Alva V., Nam SZ., Söding J., Lupas AN. (2016) <b>The MPI Bioinformatics Toolkit as an integrative platform for advanced protein sequence and structure analysis.</b> Nucleic Acids Res. pii: gkw348. <a href=https://www.ncbi.nlm.nih.gov/pubmed/27131380 target="_blank">PMID: 27131380</a></p>
+<p>Alva V., Nam SZ., Söding J., Lupas AN. (2016) <b>The MPI Bioinformatics Toolkit as an integrative platform for advanced protein sequence and structure analysis.</b> Nucleic Acids Res. pii: gkw348. <a href=https://www.ncbi.nlm.nih.gov/pubmed/27131380 target="_blank" rel="noopener">PMID: 27131380</a></p>

app/views/help/clans.scala.html

@@ -80,14 +80,14 @@
                         <li>Network: A neural net approach. Each sequence is represented by a neuron and emits a number to all other neurons. The input weights are proportional to -log P-value. In the first round each sequence emits its own sequence numbers. In consecutive rounds, each sequence emits the number which had the largest input weight. This process iterates until no further neurons change their emission number (i.e. the cluster assignment has converged)</li>
                     </ul>
                     <br/>Alternative:<br/>
-                    <p>View in CLANS. This creates a CLANS file and allows viewing of the results in a more interactive fashion in an java applet (and provides all of the above analyses. You can download a working version of CLANS <a href = ftp://ftp.tuebingen.mpg.de/pub/protevo/CLANS target="_blank">here</a>)</p>
+                    <p>View in CLANS. This creates a CLANS file and allows viewing of the results in a more interactive fashion in an java applet (and provides all of the above analyses. You can download a working version of CLANS <a href = ftp://ftp.tuebingen.mpg.de/pub/protevo/CLANS target="_blank" rel="noopener">here</a>)</p>
                 </div>
             </li>
         </ul>
     </div>
     <div id="tabs-3" class="greenlink">
         @help.citations.toolkit_citation()
-        <p>Frickey T., Lupas AN. (2004) <b>CLANS: a Java application for visualizing protein families based on pairwise similarity. </b>Bioinformatics 20(18):3702-3704. <a href = https://www.ncbi.nlm.nih.gov/pubmed/15284097 target="_blank">PMID: 15284097</a></p>
+        <p>Frickey T., Lupas AN. (2004) <b>CLANS: a Java application for visualizing protein families based on pairwise similarity. </b>Bioinformatics 20(18):3702-3704. <a href = https://www.ncbi.nlm.nih.gov/pubmed/15284097 target="_blank" rel="noopener">PMID: 15284097</a></p>
     </div>
 </div>
 

app/views/help/hhblits.scala.html

@@ -56,7 +56,7 @@
             <li class="accordion-item" data-accordion-item>
                 <a class="accordion-title">Select HMM databases</a>
                 <div class="accordion-content" data-tab-content>
-                    Select the database(s) of template HMMs against which you want to compare the query sequence or alignment.<br/><br/><a href = https://uniclust.mmseqs.com target="_blank">Uniclust30</a><br/>The Uniclust30 database is a clustered version of the Uniclust database down to a maximum pairwise sequence identity of 30%.
+                    Select the database(s) of template HMMs against which you want to compare the query sequence or alignment.<br/><br/><a href = https://uniclust.mmseqs.com target="_blank" rel="noopener">Uniclust30</a><br/>The Uniclust30 database is a clustered version of the Uniclust database down to a maximum pairwise sequence identity of 30%.
                 </div>
             </li>
             <li class="accordion-item" data-accordion-item>

app/views/help/hhfilter.scala.html

@@ -50,7 +50,7 @@
     </div>
     <div id="tabs-3" class="greenlink">
         @help.citations.toolkit_citation()
-        <p>Remmert M., Biegert A., Hauser A., Söding J. (2011) <b>HHblits: Lightning-fast iterative protein sequence searching by HMM-HMM alignment. </b>Nat Methods. 9(2):173-5. doi: 10.1038/nmeth.1818. <a href = https://www.ncbi.nlm.nih.gov/pubmed/22198341 target="_blank">PMID: 22198341</a></p>
+        <p>Remmert M., Biegert A., Hauser A., Söding J. (2011) <b>HHblits: Lightning-fast iterative protein sequence searching by HMM-HMM alignment. </b>Nat Methods. 9(2):173-5. doi: 10.1038/nmeth.1818. <a href = https://www.ncbi.nlm.nih.gov/pubmed/22198341 target="_blank" rel="noopener">PMID: 22198341</a></p>
     </div>
 </div>