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InSilicoGenome

Python codecov Documentation Status

This project is no longer developed here and will be migrated to codeberg: https://codeberg.org/JeanDelmotte/inSilicoGenome

Installation

Using pip

$ pip install -i https://test.pypi.org/simple/ insilicogenome

Using github clone conda envs with poetry

# 1) Clone the repo 
git clone git@github.com:propan2one/inSilicoGenome.git
 
# 2) create a conda env where all tools work together
#    in my case, for ease of use, I'm going to use biopython
conda create -y -p ~/envs/insilicogenome \
    --channel conda-forge python=3.11.11 Poetry
conda activate ~/envs/insilicogenome
poetry install

Features

  • TODO

Dependencies

  • TODO

Usage

  • TODO

Documentation

The official documentation is hosted on Read the Docs: https://insilicogenome.readthedocs.io/en/latest/

Contributors

We welcome and recognize all contributions. You can see a list of current contributors in the contributors tab.

Credits

This package was created with Cookiecutter and the UBC-MDS/cookiecutter-ubc-mds project template, modified from the pyOpenSci/cookiecutter-pyopensci project template and the audreyr/cookiecutter-pypackage.

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A Python utility to create artificial genomes, this tool is designed to be used in bioinformatics benchmarking pipeline.

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