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Sequencing Coverage difference after alignment?

Status: Open.

#114 In philres/ngmlr;

· AlexanderM-M opened on Aug 11, 2025

SKBR3 alignment: SRR7346978

Status: Open.

#113 In philres/ngmlr;

· MJoseMo opened on Nov 7, 2024

circular reference genomes

Status: Open.

#112 In philres/ngmlr;

· meono opened on Oct 14, 2024

Questions on loading fastq.gz, and output.sam

Status: Open.

#111 In philres/ngmlr;

· rl4940 opened on Jul 30, 2024

ngmlr stops using cpu and runs infinitely

Status: Open.

#109 In philres/ngmlr;

· snm32 opened on Mar 26, 2024

comparing large genomes

Status: Open.

#107 In philres/ngmlr;

· gentleman-asiawang opened on May 18, 2023

Length of read not equal length of quality values

Status: Open.

#106 In philres/ngmlr;

· lunky-zao opened on Mar 27, 2023

Maybe I find a new bug about RG option

Status: Open.

#105 In philres/ngmlr;

· yshcai opened on Aug 8, 2022

ONT preset values are commented out in code. Why?

Status: Open.

#104 In philres/ngmlr;

· TimD1 opened on Apr 5, 2022

Optional SAM flags

Status: Open.

#103 In philres/ngmlr;

· davidvho opened on Jan 17, 2022

running long jobs

Status: Open.

#102 In philres/ngmlr;

· bkallow opened on Sep 30, 2021

New github release?

Status: Open.

#101 In philres/ngmlr;

· nileshpatra opened on Aug 21, 2021