This repository tracks work-in-progress research into a model of antigenic drift in Sars-CoV-2 by Dr. Peter Jentsch, Dr. Finlay Maguire, and Dr. Samira Mubareka.

Please email peter_jentsch@sfu.ca if you have any questions about the model or collaboration.

To run

Ensure you have the latest stable version of Julia installed and in your PATH. This code tested on Linux only.

git clone https://github.com/pcjentsch/genomic_landscape_evolution.git
cd genomic_landscape_evolution
julia --project=SarsEvoModel

then

]instantiate
using SarsEvoModel
main()