Area
Benchmark harness / CLI
Solver (if applicable)
fenics-structural
What happened?
Trying to run just a single fenics test with:
mosaic run --solvers='fenics' --problems=structural-mesh --suites=cost
however, it runs all solvers:
Benchmark plan: 1 problem(s) x 1 suite(s) = 1 (problem, suite) pair(s)
problems: structural-mesh
suites: cost
──────────────────────────────────────────── problem: structural-mesh [1/1] ────────────────────────────────────────────
> /Users/dokken/Documents/src/debug_issues/mosaic/mosaic/benchmarks/cli.py(430)run()
-> breakpoint()
(Pdb) c
[WARN] no GPU detected — skipping GPU solvers: jax_fem. Pass --hardware all to override.
[WARN] unknown solver(s): fenics — skipping
[WARN] no matching solvers after filtering — running all
──────────────────────────────────────────────────────── build ─────────────────────────────────────────────────────────
dealii_structural → running build_base.sh (base-image wrapper)
dealii_structural → dealii_structural_mesh:latest (22.3s)
fenics_structural → fenics_structural_mesh:latest (2.0s)
[WARN] BUILD FAILED: topopt_jl — topopt_jl: tesseract build failed (exit 1):
stdout:
stderr: tructions for sensitive data (ENV "NSS_WRAPPER_PASSWD") (line 121)
Dockerfile:106
--------------------
104 | RUN apt-get update -qq && apt-get install -y -q --no-install-recommends wget ca-certificates libpython3.11
gcc g++ && rm -rf /var/lib/apt/lists/*
105 | RUN wget -q https://julialang-s3.julialang.org/bin/linux/x64/1.11/julia-1.11.3-linux-x86_64.tar.gz -O
/tmp/julia.tar.gz && tar -xzf /tmp/julia.tar.gz -C /usr/local --strip-components=1 && rm /tmp/julia.tar.gz
106 | >>> RUN mkdir -p /app/julia_env /app/julia_depot && JULIA_PYTHONCALL_LIB=$(find /usr/lib -name
'libpython3*.so.1.0' 2>/dev/null | head -1) && echo "Using JULIA_PYTHONCALL_LIB=$JULIA_PYTHONCALL_LIB" &&
JULIA_PYTHONCALL_LIB=$JULIA_PYTHONCALL_LIB julia --project=/app/julia_env -e 'using Pkg;
Pkg.add([Pkg.PackageSpec(name="TopOpt", version="0.11.0"), Pkg.PackageSpec(name="Nonconvex", version="2.2.0"),
Pkg.PackageSpec(name="NonconvexMMA", version="1.1.1"), Pkg.PackageSpec(name="Zygote", version="0.6.77"),
Pkg.PackageSpec(name="ChainRulesCore", version="1.26.1"), Pkg.PackageSpec(name="PythonCall", version="0.9.31")]);
Pkg.precompile()'
107 | RUN chmod -R 777 /app
108 |
--------------------
ERROR: failed to build: failed to solve: process "/bin/sh -c mkdir -p /app/julia_env /app/julia_depot &&
JULIA_PYTHONCALL_LIB=$(find /usr/lib -name 'libpython3*.so.1.0' 2>/dev/null | head -1) && echo \"Using
JULIA_PYTHONCALL_LIB=$JULIA_PYTHONCALL_LIB\" && JULIA_PYTHONCALL_LIB=$JULIA_PYTHONCALL_LIB julia
--project=/app/julia_env -e 'using Pkg; Pkg.add([Pkg.PackageSpec(name=\"TopOpt\", version=\"0.11.0\"),
Pkg.PackageSpec(name=\"Nonconvex\", version=\"2.2.0\"), Pkg.PackageSpec(name=\"NonconvexMMA\", version=\"1.1.1\"),
Pkg.PackageSpec(name=\"Zygote\", version=\"0.6.77\"), Pkg.PackageSpec(name=\"ChainRulesCore\", version=\"1.26.1\"),
Pkg.PackageSpec(name=\"PythonCall\", version=\"0.9.31\")]); Pkg.precompile()'" did not complete successfully: exit code:
133
[-] Error building Tesseract.
Aborting
firedrake_structural → firedrake_structural_mesh:latest (27.2s)
building solver images... 0:00:52
⚠ 1 solver(s) failed to build and will be skipped: topopt_jl
────────────────────────────────────────── suite: cost [1/1] (overall 1/1) ───────────────────────────────────────────
3 experiment(s) queued, 4 solver(s) registered
──────────────────────────────────────────── experiment: spatial_cost [1/3] ────────────────────────────────────────────
[WARN] skipping 1 solver(s) with no built image: topopt_jl
dealii_structural nx sweep (10 sizes, 3 trials each)
Expected behavior
Should just run FEniCS.
Environment
- OS: Mac 26.6.2
- Python: 3.13
- Using conda-forge to install mosaic deps
- Mosaic tag: v0.1+paper-repro
Area
Benchmark harness / CLI
Solver (if applicable)
fenics-structural
What happened?
Trying to run just a single fenics test with:
mosaic run --solvers='fenics' --problems=structural-mesh --suites=costhowever, it runs all solvers:
Expected behavior
Should just run FEniCS.
Environment