Added a chore to migrate patient conditions

api/src/main/java/org/openmrs/module/kenyaemr/chore/MigratePatientConditionsFromObs.java

@@ -0,0 +1,50 @@
+/**
+ * This Source Code Form is subject to the terms of the Mozilla Public License,
+ * v. 2.0. If a copy of the MPL was not distributed with this file, You can
+ * obtain one at http://mozilla.org/MPL/2.0/. OpenMRS is also distributed under
+ * the terms of the Healthcare Disclaimer located at http://openmrs.org/license.
+ *
+ * Copyright (C) OpenMRS Inc. OpenMRS is a registered trademark and the OpenMRS
+ * graphic logo is a trademark of OpenMRS Inc.
+ */
+package org.openmrs.module.kenyaemr.chore;
+
+import org.openmrs.api.APIException;
+import org.openmrs.api.context.Context;
+import org.openmrs.module.kenyacore.chore.AbstractChore;
+import org.springframework.stereotype.Component;
+
+import java.io.PrintWriter;
+
+@Component("kenyaemr.chore.migratePatientConditionsFromObs")
+public class MigratePatientConditionsFromObs extends AbstractChore {
+    @Override
+    public void perform(PrintWriter printWriter) throws APIException {
+        String migrateConditions = "insert into conditions (condition_id, additional_detail, previous_version, condition_coded, condition_non_coded,\n" +
+                "                        condition_coded_name, clinical_status, verification_status, onset_date, date_created, voided,\n" +
+                "                        date_voided, void_reason, uuid, creator, voided_by, changed_by, patient_id, end_date,\n" +
+                "                        date_changed, encounter_id, form_namespace_and_path)  \n" +
+                "select null, null, null,cn1.concept_id,null,cn1.concept_id , 'inactive', 'provisional',t2.value_datetime, o1.obs_datetime,\n" +
+                "        0, null,null,null,o1.creator,null,null,o1.person_id,null,null,o1.encounter_id,null\n" +
+                "    from obs o1\n" +
+                "    left join (select * from obs where concept_id = 1284) t1\n" +
+                "    on (o1.obs_group_id = t1.obs_group_id)\n" +
+                "    LEFT JOIN concept_name cn1\n" +
+                "    ON ( cn1.concept_id = t1.value_coded )\n" +
+                "    left join (select * from obs where concept_id = 159948) t2\n" +
+                "    on (o1.obs_group_id = t2.obs_group_id)\n" +
+                "    left join (select * from obs where concept_id = 166937) t3\n" +
+                "    on (o1.obs_group_id = t3.obs_group_id)\n" +
+                "    LEFT JOIN concept_name cn3\n" +
+                "    ON ( cn3.concept_id = t3.value_coded )\n" +
+                "    where o1.obs_group_id is not null and o1.concept_id in (1284,159948,166937)\n" +
+                "    and t1.concept_id is not null  \n" +
+                " group by o1.person_id, o1.obs_group_id;";
+
+
+        Context.getAdministrationService().executeSQL(migrateConditions, false);
+
+
+        printWriter.println("Completed migrating conditions");
+    }
+}