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spliced and unspliced matrices are identical

Status: Open.

#69 In pachterlab/kallistobustools;

· dedeepyavaka opened on Nov 10, 2025

https://kallistobus.tools times out.

Status: Open.

#68 In pachterlab/kallistobustools;

· detrout opened on Oct 2, 2025

--quant-umis, kallisto quant-tcc or bustools count --em?

Status: Open.

#67 In pachterlab/kallistobustools;

· MiguelBdR opened on Apr 28, 2025

kb ref error: Bounds must entirely contain this collection

Status: Open.

#66 In pachterlab/kallistobustools;

· sartoriusana opened on Mar 12, 2025

Kb for 10X genomics Chromium v4

Status: Open.

#65 In pachterlab/kallistobustools;

· wongjy2 opened on Feb 5, 2025

Error: Number of files (2) does not match number of input files required by technology SMARTSEQ2 (3)

Status: Open.

#64 In pachterlab/kallistobustools;

· iwanttoeatyo opened on Dec 21, 2024

Extracting Transcript-Level Counts from Single-Nuclei Data for DTE/DTU Analysis

Status: Open.

#63 In pachterlab/kallistobustools;

· AkilaRanjith opened on Jul 12, 2024

.h5ad file does not contain layers spliced and unspliced

Status: Open.

#61 In pachterlab/kallistobustools;

· mdu4003 opened on Apr 26, 2024

Error: Number of files (1) does not match number of input files required by technology 10XV1 (3)

Status: Open.

#60 In pachterlab/kallistobustools;

· Gabrisfon opened on Mar 9, 2024

How to specify filtered barcodes to generate a loom file?

Status: Open.

#59 In pachterlab/kallistobustools;

· micosacak opened on Mar 1, 2024

Issue with kb count

Status: Open.

#57 In pachterlab/kallistobustools;

· lucasinchausti opened on Jan 9, 2024

Improving speed when running kb count

Status: Open.

#55 In pachterlab/kallistobustools;

· reetm09 opened on Nov 6, 2023