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    29 repositories

    • gca

      Public
      Generalized Contrastive Alignment (GCA) - NeurIPS 2024
      MIT License
      •0•0•1•0•Updated Dec 26, 2024Dec 26, 2024

    • GAFormer

      Public
      0•5•1•0•Updated Oct 8, 2024Oct 8, 2024

    • bams_interactive_vis

      Public
      Interactive visualization tool for keypoint data
      Python
      •0•0•0•0•Updated May 7, 2024May 7, 2024

    • bams

      Public
      PyTorch implementation of BAMS (https://multiscale-behavior.github.io/)
      Jupyter Notebook
      •
      Apache License 2.0
      •5•9•1•0•Updated Apr 19, 2024Apr 19, 2024

    • bams_simulated_quadrupeds

      Public
      Scripts for generating Simulated Quadrupeds Dataset from BAMS (https://multiscale-behavior.github.io/)
      Jupyter Notebook
      •
      Other
      •401•1•0•0•Updated Jan 14, 2024Jan 14, 2024

    • LatentDR

      Public
      PyTorch implementation of LatentDR
      MIT License
      •0•2•1•0•Updated Oct 27, 2023Oct 27, 2023

    • halfhop

      Public
      Official Implementation of Half-Hop
      Python
      •
      Apache License 2.0
      •2•18•1•0•Updated Oct 10, 2023Oct 10, 2023

    • PyHiWA

      Public
      Alignment between clustered datasets via hierarchical Wasserstein distance
      Jupyter Notebook
      •3•37•3•0•Updated Sep 26, 2023Sep 26, 2023

    • bgrl

      Public
      PyTorch implementation of BGRL (https://arxiv.org/abs/2102.06514)
      Python
      •
      Apache License 2.0
      •18•82•3•0•Updated Aug 27, 2023Aug 27, 2023

    • deepbraindisco

      Public
      Discovery of microarchitecture in brain imagery with deep learning
      Jupyter Notebook
      •0•4•0•2•Updated Jul 6, 2023Jul 6, 2023

    • lolcat

      Public
      Code for "Transcriptomic cell type structures in vivo neuronal activity across multiple time scales"
      Python
      •0•2•0•0•Updated Jun 14, 2023Jun 14, 2023

    • EIT

      Public
      PyTorch implementation of "Seeing the forest and the tree: Building representations of both individual and collective dynamics with transformers" (NeurIPS 2022)
      Python
      •
      MIT License
      •0•13•0•0•Updated Jan 4, 2023Jan 4, 2023

    • augmentation-theory

      Public
      Jupyter Notebook
      •0•1•0•0•Updated Nov 6, 2022Nov 6, 2022

    • myow-neuro

      Public
      PyTorch Implementation - Mine Your Own vieW: Self-Supervised Learning Through Across-Sample Prediction
      Python
      •
      Apache License 2.0
      •0•3•0•0•Updated Jun 24, 2022Jun 24, 2022

    • xray-thc

      Public
      x-ray microCT dataset from a thalamocortical section of mouse brain
      Jupyter Notebook
      •1•4•0•1•Updated Jun 22, 2022Jun 22, 2022

    • myow

      Public
      PyTorch Implementation - Mine Your Own vieW: Self-Supervised Learning Through Across-Sample Prediction
      Python
      •
      Apache License 2.0
      •4•31•2•0•Updated Dec 14, 2021Dec 14, 2021

    • SwapVAE

      Public
      PyTorch implementation of Swap-VAE: A self-supervised approach for generating neural activity
      Python
      •
      MIT License
      •3•13•1•0•Updated Nov 17, 2021Nov 17, 2021

    • latentOT

      Public
      Latent optimal transport (LOT) for low rank transport and clustering
      Jupyter Notebook
      •
      MIT License
      •4•19•1•0•Updated Jul 22, 2021Jul 22, 2021

    • brainsynth

      Public
      generative models to synthesize images of brains
      Jupyter Notebook
      •0•0•0•0•Updated Jul 10, 2021Jul 10, 2021

    • HandsOnTech

      Public
      Introduction to image processing and style transfer
      Jupyter Notebook
      •1•2•0•0•Updated May 8, 2020May 8, 2020

    • xbrain

      Public
      methods for segmenting large 3D brain image volumes
      Python
      •0•3•0•0•Updated Apr 3, 2019Apr 3, 2019

    • DAD

      Public
      Distribution Alignment Decoder
      Jupyter Notebook
      •0•4•0•0•Updated Mar 7, 2019Mar 7, 2019

    • arcade

      Public
      Approximating Cellular Densities (Arcade) | estimating the laminar (layer) distribution of cells in microscopy data
      MATLAB
      •
      MIT License
      •1•0•0•0•Updated Oct 2, 2018Oct 2, 2018

    • celldetect

      Public
      2D and 3D cell detection using sparse approximation
      MATLAB
      •0•1•0•0•Updated Jun 28, 2018Jun 28, 2018

    • xbrain-dvid

      Public
      Methods for segmentation and cell detection from X-ray datasets
      Apache License 2.0
      •0•4•0•0•Updated Apr 7, 2018Apr 7, 2018

    • nerds

      Public
      Matlab package for spike inference from calcium imaging data
      Jupyter Notebook
      •0•0•0•0•Updated Mar 16, 2018Mar 16, 2018

    • SEED

      Public
      sparse self-expressive decompositions
      MATLAB
      •0•4•0•0•Updated Feb 11, 2018Feb 11, 2018

    • oasis

      Public
      subset selection methods for large-scale kernel learning
      MATLAB
      •0•1•0•0•Updated Feb 10, 2018Feb 10, 2018

    • xbrain-website

      Public
      JavaScript
      •0•0•0•0•Updated Oct 17, 2017Oct 17, 2017