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    171 repositories

    • vivarium_public_health

      Public
      Vivarium microsimulation tools used to model diseases and interventions.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •6•21•1•1•Updated Nov 5, 2024Nov 5, 2024

    • vivarium

      Public
      A python microsimulation framework
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •15•45•5•1•Updated Nov 5, 2024Nov 5, 2024

    • vivarium_research

      Public
      Documentation for working on vivarium research projects.
      7•5•0•1•Updated Nov 5, 2024Nov 5, 2024

    • vivarium_inputs

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•2•0•1•Updated Nov 5, 2024Nov 5, 2024

    • pseudopeople

      Public
      pseudopeople is a Python package that generates realistic simulated data about a fictional United States population, designed for use in testing entity resolution (record linkage) methods or other data science algorithms at scale.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•19•6•6•Updated Nov 5, 2024Nov 5, 2024

    • vivarium_research_prl

      Public
      Simulation Science research team repo for probabilistic record linkage project
      HTML
      •
      BSD 3-Clause "New" or "Revised" License
      •1•1•0•1•Updated Nov 4, 2024Nov 4, 2024

    • vivarium_testing_utils

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•2•0•Updated Nov 1, 2024Nov 1, 2024

    • easylink

      Public
      Python
      •0•3•0•2•Updated Nov 1, 2024Nov 1, 2024

    • vivarium_gates_nutrition_optimization

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•2•0•0•Updated Nov 1, 2024Nov 1, 2024

    • rra-climate-health

      Public
      "A collection of geospatial models examining the relationship between climate variables, socio-demographic indicators, and health outcomes."
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•2•Updated Nov 1, 2024Nov 1, 2024

    • rra-tools

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•2•Updated Nov 1, 2024Nov 1, 2024

    • vivarium_sodium_reduction

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•1•Updated Oct 31, 2024Oct 31, 2024

    • risk_distributions

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •3•0•2•1•Updated Oct 31, 2024Oct 31, 2024

    • gbd_mapping

      Public
      Mapping of GBD entities to their metadata
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •5•9•1•0•Updated Oct 31, 2024Oct 31, 2024

    • vivarium_census_prl_synth_pop

      Public
      US Census Probabilistic Record Linkage synthetic population generation
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•2•0•0•Updated Oct 31, 2024Oct 31, 2024

    • vivarium_cluster_tools

      Public
      Tools for running Vivarium simulations on IHME's Slurm cluster
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •4•1•0•0•Updated Oct 31, 2024Oct 31, 2024

    • layered_config_tree

      Public
      A configuration structure which supports cascading layers
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • vivarium_gates_nutrition_optimization_child

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•0•0•Updated Oct 31, 2024Oct 31, 2024

    • vivarium_nih_moud

      Public
      Medications for Opioid Use Disorder Sim
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•1•Updated Oct 31, 2024Oct 31, 2024

    • vivarium_build_utils

      Public
      Utilities for performing builds in vivarium-related repositories
      Shell
      •0•1•0•0•Updated Oct 30, 2024Oct 30, 2024

    • subnational_measles_ethiopia

      Public
      0•0•0•0•Updated Oct 29, 2024Oct 29, 2024

    • climate-data

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•1•Updated Oct 28, 2024Oct 28, 2024

    • vivarium_gates_mncnh

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Oct 24, 2024Oct 24, 2024

    • global_nutrition_target_progress

      Public
      R
      •0•0•0•0•Updated Oct 22, 2024Oct 22, 2024

    • ASHER_decomp

      Public
      R
      •0•0•0•0•Updated Oct 22, 2024Oct 22, 2024

    • person_linkage_case_study

      Public
      Emulates the methods the US Census Bureau uses to link people across multiple data sources, using open-source software (Splink) and simulated data (from pseudopeople).
      data-sciencesparkrecord-linkageentity-resolutionfuzzy-matchingdaskcensus-bureaudata-matchingsplink
      HTML
      •
      BSD 3-Clause "New" or "Revised" License
      •0•3•0•0•Updated Oct 14, 2024Oct 14, 2024

    • vivarium_research_template

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•1•1•0•Updated Oct 9, 2024Oct 9, 2024

    • workshop_pletale

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Sep 24, 2024Sep 24, 2024

    • AMR-Time-Series-and-Forecasts-2024-

      Public
      GATHER compliant code for AMR timeseries paper with forecasts
      Python
      •0•0•0•0•Updated Sep 19, 2024Sep 19, 2024

    • mental_disorders

      Public
      Public code from the Mental Disorders team on the Global Burden of Disease project
      2•4•0•0•Updated Sep 18, 2024Sep 18, 2024