Computational Imaging Science Lab @ UIUC

All

15 repositories

attention-based-bilstm-sleep-scoring
Public
Codes related to the paper "Attention-Based CNN-BiLSTM for Sleep States Classification of Spatiotemporal Wide-Field Calcium Imaging Data"
deep-learning classification neuroimaging calcium-imaging attention-mechanism lstm-neural-networks mouse-brain video-classification bilstm sleep-scoring
Jupyter Notebook
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MIT License
•0•2•0•0•Updated Aug 3, 2024Aug 3, 2024
scms-dgm-evaluation
Public
Code for post-hoc analyses for DGM evaluation based on stochastic context models (SCM). Accompanies the benchmark datasets publicly available on Harvard Dataverse.
Python
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Other
•0•0•0•0•Updated Jan 30, 2024Jan 30, 2024
lanet-bus
Public
MIT License
•0•0•2•0•Updated Jan 18, 2024Jan 18, 2024
ambientflow
Public
Learning invertible generative models from lossy measurements
Python
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MIT License
•1•1•1•0•Updated Jan 2, 2024Jan 2, 2024
breast-phantom-oat
Public
BreastPhantom: modified branch for OAT virtual imaging studies
C++
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Creative Commons Zero v1.0 Universal
•9•0•0•0•Updated Jun 26, 2023Jun 26, 2023
soa-nbp
Public
GNU General Public License v3.0
•1•2•0•0•Updated May 31, 2023May 31, 2023
mining-tomo-solutions-pulse
Public
Codes related to the paper titled "Mining the manifolds of deep generative models for multiple data-consistent solutions of tomographic imaging problems" by Bhadra et al. (2022)
Python
•0•0•0•0•Updated Jul 21, 2022Jul 21, 2022
optical-fluence-normalization_3d-functional-oat_breast
Public
Codes related to the paper "Normalization of optical fluence distribution for three-dimensional functional optoacoustic tomography of the breast"
image-processing pact oat optoacoustic-imaging photoacoustic-imaging breast-imaging
MATLAB
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GNU General Public License v3.0
•0•2•0•0•Updated May 10, 2022May 10, 2022
MVG-CNN
Public
Codes related to paper "Automated sleep stage classification of wide-field calcium imaging data via multiplex visibility graphs and deep learning"
neuroimaging calcium-imaging visibility-graph mouse-brain video-classification cnn-classification sleep-scoring spatialtemporal sleep-stage-classification wide-field-optical-imaging
Python
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MIT License
•1•8•0•0•Updated Mar 3, 2022Mar 3, 2022
hallucinations-tomo-recon
Public
Codes related to the paper "On hallucinations in tomographic imaging"
image-reconstruction inverse-problems hallucinations
Python
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MIT License
•4•5•0•0•Updated Jan 20, 2022Jan 20, 2022
null-space-projection-operators
Public
Python
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GNU General Public License v3.0
•0•5•0•0•Updated Jan 5, 2022Jan 5, 2022
usct-breast-phantom
Public
Three dimensional acoustic breast phantoms for USCT studies
Python
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GNU General Public License v2.0
•5•5•2•0•Updated Aug 10, 2021Aug 10, 2021
CLS-Mask_R-CNN
Public
Crown-like Structure Detection and Segmentation in 3D Light-sheet Microscopy Imaging with Mask R-CNN
image-processing segmentation object-detection light-sheet-microcopy
Python
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Other
•0•2•1•0•Updated Aug 9, 2021Aug 9, 2021
pic-recon
Public
Code associated with the paper "Prior Image-Constrained Reconstruction using Style-Based Generative Models" accepted to ICML 2021.
image-reconstruction tensorflow latent-representations stylegan2
Python
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MIT License
•2•8•0•0•Updated Jun 14, 2021Jun 14, 2021
dataverse-pyclient
Public
A collection of python scripts to interact with large datasets on Dataverse
Python
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GNU General Public License v3.0
•0•1•0•0•Updated Jun 11, 2021Jun 11, 2021