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    16 repositories

    • ventriscar-nnunet-ext

      Public
      Extension classes for LSTM implementation for nnunetv2 (Ventricular LGE segmentation)
      Python
      •0•0•0•0•Updated Dec 11, 2025Dec 11, 2025

    • cardio-form

      Public
      CardioForm: A whole heart segmentation pipeline for CINE MRI images (LAX2, LAX4, SAX)
      Python
      •0•0•0•0•Updated Nov 27, 2025Nov 27, 2025

    • cemrg-heartbuilder

      Public
      CEMRG HeartBuilder is a Python toolkit for creating personalized whole-heart models, streamlining segmentation, meshing, and post-processing workflows for cardiac research.
      Python
      •
      Other
      •0•0•4•0•Updated Sep 18, 2025Sep 18, 2025

    • ccta

      Public
      Whole Heart Anatomical Refinement from CCTA using Extrapolation and Parcellation [Hao Xu, et al (KCL)] https://doi.org/10.48550/arXiv.2111.09650
      Python
      •0•0•0•0•Updated Sep 12, 2025Sep 12, 2025

    • cemrg-3d-printer-settings

      Public
      CEMRG 3D printer settings and wiki
      GNU General Public License v3.0
      •0•0•0•0•Updated Aug 7, 2025Aug 7, 2025

    • CemrgApp

      Public
      An Interactive Medical Imaging Platform with Image Processing and Computer Vision Toolkits for Cardiovascular Research.
      machine-learningimage-processingmedical-imaging
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •8•24•17•4•Updated Mar 14, 2025Mar 14, 2025

    • vgurev-mechbench

      Public
      Fork of vgurev's mechbench repo
      MATLAB
      •0•0•0•0•Updated Sep 19, 2024Sep 19, 2024

    • cemrg_plugin_generator

      Public
      Create MITK plugins with this simple template
      Python
      •0•0•0•0•Updated Aug 8, 2024Aug 8, 2024

    • cemrg_wearable

      Public
      Library for the analysis of wearable data
      Python
      •0•0•0•0•Updated Jul 16, 2024Jul 16, 2024

    • cemrg.vtkjs.demo

      Public
      Demo of heart model for VR using vtk.js
      public-engagementcomputer-modellingheart-
      JavaScript
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Jun 14, 2024Jun 14, 2024

    • vmtk

      Public
      the Vascular Modeling Toolkit
      C++
      •
      Other
      •178•0•0•0•Updated May 24, 2024May 24, 2024

    • code_patches

      Public
      Patches of MITK to build CemrgApp
      0•0•0•1•Updated May 8, 2024May 8, 2024

    • web.cemrg.demo

      Public
      CEMRG WebApp Demo
      JavaScript
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Mar 25, 2024Mar 25, 2024

    • cemrgapp_docker_build_env

      Public
      Build environment for CemrgApp using docker
      Dockerfile
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Feb 21, 2024Feb 21, 2024

    • resources

      Public
      Repository of SOP documents and default parameter files for CemrgApp
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Oct 27, 2023Oct 27, 2023

    • AR_pipeline

      Public
      Open-source pipeline to create augmented reality (AR) models from scientific data
      Python
      •
      Other
      •10•0•0•0•Updated Aug 7, 2023Aug 7, 2023