FOS Functional and Molecular Imaging @MIT+ETH+UZH

All

12 repositories

ABI-expression-data_generator
Public
Generate a package-manager-friendly archive of ABI gene expression maps registered in SAMRI standard space.
linux gentoo fmri portage allen-brain-atlas molecular-biology package-management histology fmri-data-analysis mouse-brain-mri
Python
•
MIT License
•0•1•0•0•Updated Oct 30, 2024Oct 30, 2024
ABI-connectivity-data_generator
Public
Generate a package-manager-friendly archive of ABI connectivity maps registered in SAMRI standard space.
linux gentoo fmri portage allen-brain-atlas package-management histology cell-biology fmri-data-analysis mouse-brain-mri
Python
•
MIT License
•0•1•1•0•Updated Oct 30, 2024Oct 30, 2024
SAMRI
Public
Small Animal Magnetic Resonance Imaging via Python.
registration neuroimaging fmri bids dwi biomedical functional-connectivity rodent small-animals fsl
Python
•
GNU General Public License v3.0
•27•42•20•0•Updated Mar 4, 2024Mar 4, 2024
mouse-brain-templates
Public
Generate a package-manager-friendly mouse brain atlases collection.
linux packaging neuroscience gentoo mri portage 3d-printing brain-imaging package-management mouse-brain-mri
Shell
•
MIT License
•7•20•2•0•Updated Aug 4, 2023Aug 4, 2023
COSplay
Public
Contrast Optimized Stimulation player
trigger-events bids biomedical stimulus-presentation optogenetics sensory-stimulation
Python
•
GNU General Public License v3.0
•3•2•9•1•Updated Jun 1, 2023Jun 1, 2023
gebuilder
Public
Gentoo System and Image Builder
docker deployment openstack gentoo portage image-builder
Shell
•
GNU General Public License v3.0
•0•11•12•0•Updated May 10, 2023May 10, 2023
mockup_mouse-brain-templates
Public
Fully integrated provenance-aware resource for the Mouse Brain Templates package
Other
•0•0•1•0•Updated Apr 25, 2023Apr 25, 2023
StereotaXYZ
Public
Toolkit for the Empirical Design of Stereotactic Brain Implants
visualization mri biomedical brain-imaging surgery optogenetics stereotactic
Python
•
GNU Lesser General Public License v3.0
•1•8•0•0•Updated May 15, 2020May 15, 2020
NeuroGentooProject
Public
Shell
•0•1•2•0•Updated Aug 17, 2018Aug 17, 2018
calciumfMRI
Public
Collection of LabView & Matlab tools for simultaneous calcium & fMRI measurements
fmri calcium-imaging biomedical
MATLAB
•
The Unlicense
•1•3•0•0•Updated Jul 24, 2018Jul 24, 2018
micropython
Public
MicroPython - a lean and efficient Python implementation for microcontrollers and constrained systems
C
•
MIT License
•7.8k•0•0•0•Updated May 15, 2018May 15, 2018
COSgen
Public
Contrast Optimized Stimulation generator
genetic-algorithm neuroimaging glm fmri biomedical optogenetics sensory-stimulation stimulus-design contrast-optimization
Python
•
GNU Lesser General Public License v3.0
•1•1•3•0•Updated Oct 9, 2017Oct 9, 2017