Skip to content

update table readers and writers to ngff table proposal #1

@giovp

Description

@giovp

hi,

with this issue, I'm referring to the discussion here: https://forum.image.sc/t/roi-annotations-and-tracking-information-in-ome-zarr/65975/4

It should be straightforward to change the current code in the notebook to readers and writers with the correct .zattr, you can see and example for

the logic is that we store the metadata necessary for the table specification: region, region_key and instance_key in the adata.uns slot, and also redundantly in the .zattrs. However, at read time, we only take it from uns (but it should be straightforward to also read it from the .zattr metadata).

let me know if you encounter any issue or for any clarification

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions