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OpenPipelines.bio v1.0.0-rc2

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@DriesSchaumont DriesSchaumont released this 12 Mar 08:12
· 17 commits to 1.0.x since this release
1.0.0-rc2
44c832c

BUG FIXES

  • Cellranger multi: Fix using a relative input path for --vdj_inner_enrichment_primers (PR #717)

  • dataflow/split_modalities: remove unused compression argument. Use output_compression instead (PR #714).

  • metadata/grep_annotation_column: fix calculating fraction when an input observation has no counts, which caused
    the result to be out of bounds.

  • Fix --output argument not working for several workflows (PR #740).

MINOR CHANGES

  • metadata/grep_annotation_column: Added more logging output (PR #697).

  • metadata/add_id and metadata/grep_annotation_column: Bump python to 3.11 (PR #697).

  • Bump viash to 0.8.5 (PR #697)

  • dataflow/split_modalities: add more logging output and bump python to 3.12 (PR #714).

  • correction/cellbender: Update nextflow resource labels from singlecpu and lowmem to midcpu and midmem (PR #736)

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