Component List v1.3.1

This page summarizes the packaged components available in the OpenHPC repository. These components are organized by groupings based on their general functionality, and links point to where additional information can be obtained for each component. Note that many of the 3rd party community libraries that are pre-packaged with OpenHPC are built using multiple compiler and MPI families. In these cases, the underlying RPM package names include delimiters identifying the development environment for which each package build is targeted.

Administrative Tools:

• clustershell http://clustershell.sourceforge.net
• conman http://dun.github.io/conman
• docs https://github.com/openhpc/ohpc
• examples https://github.com/openhpc/ohpc
• ganglia http://ganglia.sourceforge.net
• genders https://github.com/chaos/genders
• lmod-defaults https://github.com/openhpc/ohpc
• lmod https://github.com/TACC/Lmod
• losf https://github.com/hpcsi/losf
• mrsh https://github.com/chaos/genders
• nagios-plugins https://www.nagios-plugins.org
• nagios http://www.nagios.org
• ndoutils http://www.nagios.org/download/addons
• nrpe http://www.nagios.org
• pdsh http://sourceforge.net/projects/pdsh
• prun https://github.com/openhpc/ohpc
• test-suite https://github.com/openhpc/ohpc/tests

Compiler Families:

• Gnu Compiler Suite http://gcc.gnu.org
• Intel Compiler Compatibility Package https://github.com/openhpc/ohpc

Development Tools:

• EasyBuild http://hpcugent.github.com/easybuild
• automake http://www.gnu.org/software/automake
• autoconf http://www.gnu.org/software/autoconf
• hwloc http://www.open-mpi.org/projects/hwloc
• libtool http://www.gnu.org/software/libtool
• python-scipy http://www.scipy.org
• python-numpy http://sourceforge.net/projects/numpy
• spack https://github.com/LLNL/spack
• valgrind http://www.valgrind.org

Updates of Distro-provided packages:

• lua-bit http://bitop.luajit.org
• lua-filesystem http://keplerproject.github.com/luafilesystem
• lua-posix https://github.com/luaposix/luaposix

IO Libraries:

• adios http://www.olcf.ornl.gov/center-projects/adios
• hdf5 http://www.hdfgroup.org/HDF5
• netcdf-cxx http://www.unidata.ucar.edu/software/netcdf
• netcdf http://www.unidata.ucar.edu/software/netcdf
• netcdf-fortran http://www.unidata.ucar.edu/software/netcdf
• phdf5 http://www.hdfgroup.org/HDF5
• sionlib http://www.fz-juelich.de/ias/jsc/EN/Expertise/Support/Software/SIONlib/_node.html

Lustre packages:

• lustre-client https://wiki.hpdd.intel.com
• shine http://lustre-shine.sourceforge.net

MPI Runtime Families:

• Intel MPI Compatibility Package https://github.com/openhpc/ohpc
• mpich http://www.mpich.org
• mvapich2 http://mvapich.cse.ohio-state.edu/overview/mvapich2
• openmpi http://www.open-mpi.org

Parallel Libraries:

• boost http://www.boost.org
• fftw http://www.fftw.org
• hypre http://www.llnl.gov/casc/hypre
• mumps http://mumps.enseeiht.fr
• petsc http://www.mcs.anl.gov/petsc
• superlu_dist http://crd-legacy.lbl.gov/~xiaoye/SuperLU
• trilinos http://trilinos.sandia.gov/index.html

Performance Tools:

• imb https://software.intel.com/en-us/articles/intel-mpi-benchmarks
• mpiP http://mpip.sourceforge.net
• papi http://icl.cs.utk.edu/papi
• pdtoolkit http://www.cs.uoregon.edu/Research/pdt
• scalasca http://www.scalasca.org
• scorep http://www.vi-hps.org/projects/score-p
• tau http://www.cs.uoregon.edu/research/tau/home.php

Provisioning Tools:

• warewulf http://warewulf.lbl.gov

Resource Management:

• munge http://dun.github.io/munge
• PBSPro https://github.com/pbspro/pbspro
• slurm http://slurm.schedmd.com

Runtimes:

• ocr https://xstack.exascale-tech.com/wiki
• singularity http://singularity.lbl.gov

Serial Libraries:

• R http://www.r-project.org
• gsl http://www.gnu.org/software/gsl
• metis http://glaros.dtc.umn.edu/gkhome/metis/metis/overview
• openblas http://www.openblas.net
• superlu http://crd.lbl.gov/~xiaoye/SuperLU