Update dependencies

[mgeplf]

Package                    Version         Latest          DirectDep
-------------------------- --------------- --------------- -----
alembic                    1.16.5          1.17.1          Yes       https://github.com/sqlalchemy/alembic/compare/rel_1_16_5...rel_1_17_1    https://alembic.sqlalchemy.org/en/latest/changelog.html
boto3                      1.40.29         1.40.61         Yes       https://github.com/boto/boto3/compare/1.40.29...1.40.61.                               https://github.com/boto/boto3/blob/develop/CHANGELOG.rst
cachetools                 6.2.0           6.2.1           Yes       https://github.com/tkem/cachetools/compare/v6.2.0...v6.2.1               https://github.com/tkem/cachetools/blob/master/CHANGELOG.rst
click                      8.2.1           8.3.0           Yes       Not important; only for import
fastapi                    0.116.1         0.120.1         Yes       https://github.com/fastapi/fastapi/compare/0.116.0...0.120.1             https://fastapi.tiangolo.com/release-notes/
h5py                       3.14.0          3.15.1          Yes       Not important; only for import
openai                     1.101.0         2.6.1           Yes       https://github.com/openai/openai-python/compare/v1.101.0...v2.6.1
psycopg2                   2.9.10          2.9.11          Yes       https://github.com/psycopg/psycopg2/compare/2.9.10...2.9.11              https://www.psycopg.org/docs/news.html
pydantic                   2.11.7          2.12.3          Yes       https://github.com/pydantic/pydantic/compare/v2.11.7...v2.12.3           https://docs.pydantic.dev/latest/changelog/
pydantic-settings          2.10.1          2.11.0          Yes       https://github.com/pydantic/pydantic-settings/compare/2.10.1...v2.11.0
sqlalchemy                 2.0.43          2.0.44          Yes       https://github.com/sqlalchemy/sqlalchemy/compare/rel_2_0_43...rel_2_0_44 https://docs.sqlalchemy.org/en/20/changelog/changelog_20.html#change-2.0.45
uvicorn                    0.35.0          0.38.0          Yes       https://github.com/Kludex/uvicorn/compare/0.37.0...0.38.0                https://uvicorn.dev/release-notes/
anyio                      4.10.0          4.11.0
botocore                   1.40.29         1.40.61
botocore-stubs             1.40.29         1.40.61
certifi                    2025.8.3        2025.10.5
charset-normalizer         3.4.3           3.4.4
coverage                   7.10.6          7.11.0
cryptography               45.0.7          46.0.3
entitysdk                  0.8.4           0.8.5
httptools                  0.6.4           0.7.1
idna                       3.10            3.11
iniconfig                  2.1.0           2.3.0
jiter                      0.10.0          0.11.1
markupsafe                 3.0.2           3.0.3
moto                       5.1.12          5.1.15
numpy                      2.3.3           2.3.4
py-partiql-parser          0.6.1           0.6.3
pydantic-core              2.33.2          2.41.4
pyright                    1.1.405         1.1.407
python-dotenv              1.1.1           1.2.1
pyyaml                     6.0.2           6.0.3
rich                       14.1.0          14.2.0
ruff                       0.13.0          0.14.2
scipy                      1.16.2          1.16.3
starlette                  0.47.3          0.49.1
types-awscrt               0.27.6          0.28.2
types-boto3-cloudformation 1.40.24         1.40.57
types-boto3-dynamodb       1.40.20         1.40.56
types-boto3-ec2            1.40.24         1.40.61
types-boto3-lambda         1.40.7          1.40.61
types-boto3-lite           1.40.29         1.40.61
types-boto3-rds            1.40.29         1.40.50
types-boto3-s3             1.40.26         1.40.61
types-boto3-sqs            1.40.17         1.40.61
types-cachetools           6.2.0.20250827  6.2.0.20251022
types-pyyaml               6.0.12.20250822 6.0.12.20250915
types-s3transfer           0.13.1          0.14.0
typing-inspection          0.4.1           0.4.2
uvloop                     0.21.0          0.22.1
watchfiles                 1.1.0           1.1.1
xmltodict                  0.15.1          1.0.2

[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.

Flag	Coverage Δ
pytest	97.48% <ø> (-0.01%)	⬇️

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Files with missing lines	Coverage Δ
app/routers/emodel.py	100.00% <ø> (ø)

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[mgeplf]

alembic: seems safe
boto3: hard to tell from changelog, mainly updates to AWS apis?
cachetools: according to changelog, nothing impacting us
click: Not important; only for import
fastapi: dependency upgrades(fix for starlette); otherwise seems safe
h5py: Not important; only for import
openai: lots of changes in the repo; I assume the API wasn't broken - perhaps @jankrepl can comment?
psycopg2: few changes, fixed segfault and postgresql 18
pydantic: seems ok
pydantic-settings: seems ok
sqlalchemy: bug fixes; hard to know if we are relying on old behavior though
uvicorn: looks ok

[jankrepl]

openai: lots of changes in the repo; I assume the API wasn't broken - perhaps @jankrepl can comment?

I checked the release notes and don't think it will break the logic in entitycore. So from my side you have a green light:) @mgeplf

[mgeplf]

@jankrepl > So from my side you have a green light:)

Great, thanks for looking.