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Refactoring and TODO removal #79

@ue71603

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@ue71603
  • More modular
  • test_network_flow should not contain functions needed by server and server_ojp2
  • deciding if ojp 1 files should be marked as well.
  • dealing with some todos
  • tests move to test folder.
  • generate all generated parts.
  • thinking about end to end tests.
  • removing TODO

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