Merge pull request #48 from omics-datascience/dev

new version 2.1.0

ModulectorBackend/settings.py

@@ -13,7 +13,7 @@
 import os
 
 # Modulector version
-VERSION: str = '2.0.3'
+VERSION: str = '2.1.0'
 
 # Default primary key field type
 # https://docs.djangoproject.com/en/4.0/ref/settings/#default-auto-field
@@ -57,7 +57,8 @@
 ]
 
 CRONJOBS = [
-    ('0 0 * * SAT', 'modulector.pubmed_job.execute', '>> ' + BASE_DIR + '/jobs_log.log')
+    ('0 0 * * SAT', 'modulector.pubmed_job.execute',
+     '>> ' + BASE_DIR + '/jobs_log.log')
 ]
 CRONTAB_LOCK_JOBS = True
 ALLOW_PARALLEL_RUNS = False
@@ -84,8 +85,7 @@
 TEMPLATES = [
     {
         'BACKEND': 'django.template.backends.django.DjangoTemplates',
-        'DIRS': [os.path.join(BASE_DIR, 'templates')]
-        ,
+        'DIRS': [os.path.join(BASE_DIR, 'templates')],
         'APP_DIRS': True,
         'OPTIONS': {
             'context_processors': [

ModulectorBackend/settings_ci.py

@@ -13,7 +13,7 @@
 import os
 
 # Modulector version
-VERSION: str = '2.0.3'
+VERSION: str = '2.1.0'
 
 # Build paths inside the project like this: os.path.join(BASE_DIR, ...)
 BASE_DIR = os.path.dirname(os.path.dirname(os.path.abspath(__file__)))
@@ -53,7 +53,8 @@
 ]
 
 CRONJOBS = [
-    ('0 0 * * SAT', 'modulector.pubmed_job.execute', '>> ' + BASE_DIR + '/jobs_log.log')
+    ('0 0 * * SAT', 'modulector.pubmed_job.execute',
+     '>> ' + BASE_DIR + '/jobs_log.log')
 ]
 CRONTAB_LOCK_JOBS = True
 ALLOW_PARALLEL_RUNS = False
@@ -80,8 +81,7 @@
 TEMPLATES = [
     {
         'BACKEND': 'django.template.backends.django.DjangoTemplates',
-        'DIRS': [os.path.join(BASE_DIR, 'templates')]
-        ,
+        'DIRS': [os.path.join(BASE_DIR, 'templates')],
         'APP_DIRS': True,
         'OPTIONS': {
             'context_processors': [

ModulectorBackend/settings_dev.py

@@ -13,7 +13,7 @@
 import os
 
 # Modulector version
-VERSION: str = '2.0.3'
+VERSION: str = '2.1.0'
 
 # Build paths inside the project like this: os.path.join(BASE_DIR, ...)
 BASE_DIR = os.path.dirname(os.path.dirname(os.path.abspath(__file__)))
@@ -53,7 +53,8 @@
 ]
 
 CRONJOBS = [
-    ('0 0 * * SAT', 'modulector.pubmed_job.execute', '>> ' + BASE_DIR + '/jobs_log.log')
+    ('0 0 * * SAT', 'modulector.pubmed_job.execute',
+     '>> ' + BASE_DIR + '/jobs_log.log')
 ]
 CRONTAB_LOCK_JOBS = True
 ALLOW_PARALLEL_RUNS = False
@@ -80,8 +81,7 @@
 TEMPLATES = [
     {
         'BACKEND': 'django.template.backends.django.DjangoTemplates',
-        'DIRS': [os.path.join(BASE_DIR, 'templates')]
-        ,
+        'DIRS': [os.path.join(BASE_DIR, 'templates')],
         'APP_DIRS': True,
         'OPTIONS': {
             'context_processors': [

ModulectorBackend/urls.py

@@ -22,10 +22,8 @@
 urlpatterns = [
     path('admin/', admin.site.urls),
     path('mirna/', views.MirnaList.as_view({'get': 'list'}), name='mirna'),
-    path('mirna-target-interactions/', views.MirnaTargetInteractions.as_view({'get': 'list'}),
+    path('mirna-target-interactions/', views.MirnaTargetInteractions.as_view(),
          name='mirna_target_interactions'),
-    path('mirna-interactions/', views.MirnaInteractions.as_view(),
-         name='mirna_interactions'),
     path('mirna-aliases/', views.MirnaAliasesList.as_view(), name='mirna_aliases'),
     path('mirna-codes/', views.MirnaCodes.as_view(), name='mirna_codes'),
     path('mirna-codes-finder/', views.MirnaCodesFinder.as_view(),
@@ -34,6 +32,7 @@
     path('drugs/', views.MirnaDrugsList.as_view(), name='drugs'),
     path('subscribe-pubmeds/', views.SubscribeUserToPubmed.as_view()),
     path('unsubscribe-pubmeds/', views.UnsubscribeUserToPubmed.as_view()),
+    path('methylation/', views.MethylationDetails.as_view(), name='methylation'),
     path('methylation-sites-finder/', views.MethylationSitesFinder.as_view(),
          name='methylation_sites_finder'),
     path('methylation-sites/', views.MethylationSites.as_view(),