Rebase of checksum work onto develop#905

Merged

joshmoore merged 49 commits intoome:developfrom

bpindelski:chksm-rebase

Mar 25, 2013

Commits on Mar 21, 2013

Add Google Guava 13.0 (JDK 1.5)
Blazej Pindelski
committed
Add ChecksumVerifier interface and class
Blazej Pindelski
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Implement checksum factory
Blazej Pindelski
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Rename methods in checksum package
Blazej Pindelski
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Move FileUploader utility from common to server
Blazej Pindelski
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Move checksum package to common/ome/util
Blazej Pindelski
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Inject ChecksumProviderFactory into collaborators
Blazej Pindelski
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Fix tests in omero-server
Blazej Pindelski
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Final round of test fixes in omero-server
Blazej Pindelski
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Add unit tests for the checksum package
Blazej Pindelski
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Add checksum test package to TestNG suite
Blazej Pindelski
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Add comments and licences and correct minor bugs
Blazej Pindelski
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Fix minor typos and refactor logic
Blazej Pindelski
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Fix typo in exception message
Blazej Pindelski
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Fix comment markers in TestNG XML files
Blazej Pindelski
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Fix classpath for unit tests in omero-common
Blazej Pindelski
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Introduce AbstractChecksumProvider and refactor
Blazej Pindelski
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Remove default provider and update consumers
Blazej Pindelski
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Bring back Utils methods and deprecate them
Blazej Pindelski
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Refactor ChecksumProvider into a fluent interface
Blazej Pindelski
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Refactor checksum test classes
Blazej Pindelski
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Rename methods in ChecksumProvider interface
Blazej Pindelski
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Propagate new checksum usage through codebase
Blazej Pindelski
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Update commons-codec to 1.6
Blazej Pindelski
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Add commons-codec to omero-common
Blazej Pindelski
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Replace bytesToHex methods with commons-codec
Blazej Pindelski
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Fix checksumProviderFactory missing in Spring ctx
Blazej Pindelski
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Update Javadoc with @deprecated note
Blazej Pindelski
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Use checksumAsString instead of Hex.encode*
Blazej Pindelski
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Make the Javadoc explicit about calling reset()
Blazej Pindelski
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Remove the commons-codec from omero-common
Blazej Pindelski
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Use guava.Files when calculating file checksum
Blazej Pindelski
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Add missing Javadoc and remove unused field
Blazej Pindelski
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Remove reset(), rename method and update comments
Blazej Pindelski
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Add logic for defensive checksumAs* methods
Blazej Pindelski
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Fix tests and consumers to use new method name
Blazej Pindelski
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Adjust putBytes for truncated byte buffers.

mtbc
authored and
Blazej Pindelski
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Add unit test for truncated ByteBuffer
Blazej Pindelski
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Fix usage of ChecksumProvider in RawFileBean
Blazej Pindelski
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Fix usage of ChecksumProvider in ImportLibrary
Blazej Pindelski
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Fix usage of ChecksumProvider in OmeroJava
Blazej Pindelski
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Fix ChecksumProvider usage in CheckedPath
Blazej Pindelski
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Fix calculation of checksum in ImportLibrary
Blazej Pindelski
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Add putBytes(byte[], int, int) and update tests
Blazej Pindelski
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Fix injection of ChecksumProviderFactory
Blazej Pindelski
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Fix wrong event call
Blazej Pindelski
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Update Javadoc on putBytes(byte[], int, int)
Blazej Pindelski
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Complete ChecksumProvider Javadoc.

mtbc
authored and
Blazej Pindelski
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Add Guava JAR to Insight build.

mtbc
authored and
Blazej Pindelski
committed