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OME-TIFF Big Images 10761 #28

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Merged
joshmoore merged 1 commit into from
Apr 24, 2013
Merged

OME-TIFF Big Images 10761 #28

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7 changes: 7 additions & 0 deletions omero/export_scripts/Batch_Image_Export.py
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Original file line number Diff line number Diff line change
Expand Up @@ -349,6 +349,11 @@ def getTrange(sizeT, scriptParams):
if format == 'OME-TIFF':
for img in images:
log("Exporting image as OME-TIFF: %s" % img.getName())
if img._prepareRE().requiresPixelsPyramid():
log( " ** Can't export a 'Big' image to OME-TIFF. **")
if len(images) == 1:
return None, "Can't export a 'Big' image to OME-TIFF."
continue
saveAsOmeTiff(conn, img, folder_name)

else:
Expand Down Expand Up @@ -387,6 +392,8 @@ def getTrange(sizeT, scriptParams):
finally:
logFile.close()

if len(os.listdir(exp_dir)) == 0:
return None, "No files exported. See 'info' for more details"
# zip everything up (unless we've only got a single ome-tiff)
if format == 'OME-TIFF' and len(os.listdir(exp_dir)) == 1:
ometiffIds = [t.id for t in parent.listAnnotations(ns=omero.constants.namespaces.NSOMETIFF)]
Expand Down