Commits

Breadcrumbs

History for

on945469d

User selector

All users

Datepicker

All time

Commit History

Commits on Jun 1, 2021

• Updating both CPU and GPU to TF2.5, and CUDA (11.3) and CUDNN (8.2).

  Show description for 582c36e
  

  pichuan

  authored and

  copybara-github

  committed
  582c36e

  Copy full SHA for 582c36e

Commits on May 26, 2021

• Resubmit a previous change:

  Show description for b1ae894
  

  pichuan

  authored and

  copybara-github

  committed
  b1ae894

  Copy full SHA for b1ae894

Commits on May 18, 2021

• Automated g4 rollback of changelist 374425378

  Show description for 9b3f8d2
  

  pichuan

  authored and

  copybara-github

  committed
  9b3f8d2

  Copy full SHA for 9b3f8d2

• * Update CPU use to Ubuntu20.04

  Show description for 9ae625b
  

  pichuan

  authored and

  copybara-github

  committed
  9ae625b

  Copy full SHA for 9ae625b

Commits on May 14, 2021

• Clean up our build_clif.sh script. Main changes:

  Show description for 4a45b3b
  

  pichuan

  authored and

  copybara-github

  committed
  4a45b3b

  Copy full SHA for 4a45b3b

Commits on Mar 16, 2021

• Fixes intermittent failures about dpkg lock in the DeepVariant setup scripts, by waiting for a dpkg lock for up to 5 minutes.

  Show description for a9404a3
  

  tedyun

  authored and

  copybara-github

  committed
  a9404a3

  Copy full SHA for a9404a3

Commits on Mar 4, 2021

• Add retries for flaky apt-get install affecting automated test builds.

  Show description for 487d1e1
  

  MariaNattestad

  authored and

  copybara-github

  committed
  487d1e1

  Copy full SHA for 487d1e1

Commits on Mar 3, 2021

• Update build-prereq.sh to directly build pyclif binary from the latest clif repo.

  Show description for 4fc2bf3
  

  pichuan

  authored and

  copybara-github

  committed
  4fc2bf3

  Copy full SHA for 4fc2bf3

Commits on Feb 16, 2021

• Update our scripts to make it clear that we've only tested on Ubuntu18.04.

  Show description for 82223b4
  

  pichuan

  authored and

  copybara-github

  committed
  82223b4

  Copy full SHA for 82223b4

Commits on Nov 6, 2020

• Update to TensorFlow 2.3.0, and relevant updates required.

  Show description for 0d7eb5c
  

  pichuan

  authored and

  copybara-github

  committed
  0d7eb5c

  Copy full SHA for 0d7eb5c

Commits on May 18, 2020

• Install wget for build scripts.

  Show description for be12816
  

  gunjanbaid

  authored and

  copybara-github

  committed
  be12816

  Copy full SHA for be12816

Commits on May 14, 2020

• Replace curl download with gsutil cp.

  Show description for d343b89
  

  gunjanbaid

  authored and

  copybara-github

  committed
  d343b89

  Copy full SHA for d343b89

Commits on Dec 11, 2019

• Migrate to Python3.

  Show description for 9640969
  

  pichuan

  authored and

  copybara-github

  committed
  9640969

  Copy full SHA for 9640969

Commits on Mar 27, 2019

• Make the build scripts quieter, so that the experience of running run-prereq.sh, build-prereq.sh, or docker build with Dockerfile can be less overwhelming.

  Show description for 0c1d859
  

  pichuan

  authored and

  Copybara-Service

  committed
  0c1d859

  Copy full SHA for 0c1d859

Commits on Mar 15, 2019

• Fixed small typo in build-prereq.sh.

  Show description for 245f4bb
  

  Genomics team in Google Brain

  authored and

  Copybara-Service

  committed
  245f4bb

  Copy full SHA for 245f4bb

Commits on Jan 21, 2019

• Install lsb-release

  Show description for 4bc63ee
  

  nmousavi

  authored and

  Copybara-Service

  committed
  4bc63ee

  Copy full SHA for 4bc63ee

Commits on Jan 17, 2019

• Remove java installation.

  Show description for 3ce7a7b
  

  pichuan

  authored and

  Copybara-Service

  committed
  3ce7a7b

  Copy full SHA for 3ce7a7b

Commits on Dec 4, 2018

• Change to "Google LLC." in headers.

  Show description for c838457
  

  pichuan

  authored and

  Copybara-Service

  committed
  c838457

  Copy full SHA for c838457

Commits on Oct 25, 2018

• Update build-prereq.sh to work with Ubuntu 18.04.

  Show description for 37f864b
  

  pichuan

  authored and

  Copybara-Service

  committed
  37f864b

  Copy full SHA for 37f864b

Commits on Sep 6, 2018

• Cleanup how we access bazel in build-prereq.sh and settings.sh

  Show description for 64ba4ea
  

  mdepristo

  authored and

  Copybara-Service

  committed
  64ba4ea

  Copy full SHA for 64ba4ea

Commits on Jul 11, 2018

• Upgrade bazel version to 0.15.0, fixing broken build with latest TensorFlow build changes. Refactor the bazel installation and version checking code for clarity. Moved the bazel version variable fr…

  Show description for e872232
  

  mdepristo

  authored and

  Copybara-Service

  committed
  e872232

  Copy full SHA for e872232

Commits on Jul 2, 2018

• Make DeepVariant and Nucleus builds robust to an existing TensorFlow clone.

  Show description for 92a3566
  

  mdepristo

  authored and

  Copybara-Service

  committed
  92a3566

  Copy full SHA for 92a3566

Commits on Jun 28, 2018

• Update DeepVariant to use TensorFlow 1.9. Reorganize settings, build-prereq, and run-prereq to make the version of TF used by DV much clearer by bringing together all of the TF versions used in the…

  Show description for 0751200
  

  mdepristo

  authored and

  Copybara-Service

  committed
  0751200

  Copy full SHA for 0751200

Commits on Jun 26, 2018

• Fix build

  Show description for 5417f15
  

  Genomics team in Google Brain

  authored and

  Copybara-Service

  committed
  5417f15

  Copy full SHA for 5417f15

Commits on May 25, 2018

• Adding sudo -H, because this is writing to a system file. Also, unfortunately it seems like we need --allow-unauthenticated.

  Show description for b313e09
  

  pichuan

  authored and

  Copybara-Service

  committed
  b313e09

  Copy full SHA for b313e09

Commits on May 2, 2018

• Fix the java installation in the DeepVariant OSS prereqs, which is

  Show description for ad76aef
  

  Genomics team in Google Brain

  authored and

  Copybara-Service

  committed
  ad76aef

  Copy full SHA for ad76aef

Commits on Apr 16, 2018

• Pinning TensorFlow version in build-prereq.sh as well, and make sure the version of io_bazel_rules_closure is consistent.

  Show description for 0793cee
  

  pichuan

  authored and

  Copybara-Service

  committed
  0793cee

  Copy full SHA for 0793cee

Commits on Mar 6, 2018

• Upgrade Bazel to version 0.11.0. (TensorFlow now requires at least 0.10.0).

  Show description for 452be20
  

  Genomics team in Google Brain

  authored and

  Copybara-Service

  committed
  452be20

  Copy full SHA for 452be20

Commits on Feb 12, 2018

• build-prereq.sh updates for Debian:

  Show description for 22b9bb2
  

  Genomics team in Google Brain

  authored and

  Copybara-Service

  committed
  22b9bb2

  Copy full SHA for 22b9bb2

Commits on Jan 31, 2018

• Unpin the second TensorFlow

  Show description for e3cf0c8
  

  rpoplin

  authored and

  Copybara-Service

  committed
  e3cf0c8

  Copy full SHA for e3cf0c8

Commits on Jan 22, 2018

• Updating version numbers of our dependencies.

  Show description for 6ddf905
  

  rpoplin

  authored and

  Copybara-Service

  committed
  6ddf905

  Copy full SHA for 6ddf905

Commits on Jan 10, 2018

• Fix typo, s/bazel_version/bazel_ver/

  Show description for 9392833
  

  Genomics team in Google Brain

  authored and

  Copybara-Service

  committed
  9392833

  Copy full SHA for 9392833

Commits on Jan 8, 2018

• Replace gsutil with curl to get files for setup.

  Show description for 4f57e2e
  

  arostamianfar

  authored and

  Copybara-Service

  committed
  4f57e2e

  Copy full SHA for 4f57e2e

Commits on Jan 5, 2018

• Ensure that a specific bazel version is installed.

  Show description for 8a56cd7
  

  Genomics team in Google Brain

  authored and

  Copybara-Service

  committed
  8a56cd7

  Copy full SHA for 8a56cd7

Commits on Dec 4, 2017

• Unpinning the second tensorflow.

  Show description for c13c453
  

  Genomics team in Google Brain

  authored and

  Copybara-Service

  committed
  c13c453

  Copy full SHA for c13c453

Pagination

Previous

Next