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diff --git a/Covariation_shiny/rsconnect/shinyapps.io/nzilbb/Covariation_app.dcf b/Covariation_shiny/rsconnect/shinyapps.io/nzilbb/Covariation_app.dcf
diff --git a/Covariation_shiny/rsconnect/shinyapps.io/nzilbb/Covariation_shiny.dcf b/Covariation_shiny/rsconnect/shinyapps.io/nzilbb/Covariation_shiny.dcf
diff --git a/Covariation_shiny/rsconnect/shinyapps.io/onze/Covariation_shiny.dcf b/Covariation_shiny/rsconnect/shinyapps.io/onze/Covariation_shiny.dcf
diff --git a/Data/ONZE_vowels_filtered_anon_extra.rds b/Data/ONZE_vowels_filtered_anon_extra.rds
diff --git a/README.md b/README.md
@@ -2,32 +2,32 @@
 
 Brand, J., Hay, J., Clark, L., Watson, K., & Sóskuthy, M. (submitted). Systematic co-variation of monophthongs across speakers of New Zealand English.
 
-[![](https://img.shields.io/badge/GitHub-repo-blue?labelColor=lightgrey&logo=github)](https://github.com/jamesbrandscience/Covariation_monophthongs_NZE_2020)
+[![](https://img.shields.io/badge/GitHub-repo-blue?labelColor=lightgrey&logo=github)](https://github.com/nzilbb/Covariation_monophthongs_NZE)
 [![](https://tinyurl.com/osfshield1)](https://osf.io/q4j29/)
-[![](https://img.shields.io/badge/Preprint-pdf-blue?labelColor=lightgrey&logo=Adobe-Acrobat-Reader)](https://jamesbrandscience.github.io/Covariation_monophthongs_NZE_2020/Write_up/Covariation_monophthongs_NZE_2020.pdf)
-[![](https://img.shields.io/badge/Analysis-html-blue?labelColor=lightgrey&logo=RStudio&logoColor=GhostWhite)](https://jamesbrandscience.github.io/Covariation_monophthongs_NZE_2020/Analysis/Covariation_monophthongs_analysis.html)
+[![](https://img.shields.io/badge/Preprint-pdf-blue?labelColor=lightgrey&logo=Adobe-Acrobat-Reader)](https://nzilbb.github.io/Covariation_monophthongs_NZE_2020/Write_up/Covariation_monophthongs_NZE_2020.pdf)
+[![](https://img.shields.io/badge/Analysis-html-blue?labelColor=lightgrey&logo=RStudio&logoColor=GhostWhite)](https://nzilbb.github.io/Covariation_monophthongs_NZE/Covariation_monophthongs_analysis.html)
 [![](https://img.shields.io/badge/Shiny-link-blue?labelColor=lightgrey&logo=RStudio&logoColor=GhostWhite)](https://nzilbb.shinyapps.io/Covariation_shiny/)
 
-![](https://img.shields.io/github/last-commit/jamesbrandscience/Covariation_monophthongs_NZE_2020)
-![](https://img.shields.io/github/downloads/jamesbrandscience/Covariation_monophthongs_NZE_2020/total.svg)
+![](https://img.shields.io/github/last-commit/nzilbb/Covariation_monophthongs_NZE)
+![](https://img.shields.io/github/downloads/nzilbb/Covariation_monophthongs_NZE/total.svg)
 
 ---
 
 ### Download
 
 You can download this repository as a `.zip` file, with all the files described below (advised):
 
-[![](https://img.shields.io/badge/download-.zip-brightgreen)](https://github.com/jamesbrandscience/Covariation_monophthongs_NZE_2020/archive/master.zip)
+[![](https://img.shields.io/badge/download-.zip-brightgreen)](https://github.com/nzilbb/Covariation_monophthongs_NZE_2020/archive/master.zip)
 
 Or you can clone this repository using your terminal/command prompt (if you are familiar with GitHub, advised):
 
 ```
-git clone https://github.com/jamesbrandscience/Covariation_monophthongs_NZE_2020.git
+git clone https://github.com/nzilbb/Covariation_monophthongs_NZE_2020.git
 ```
 
 Or fork it on GitHub (if you are familiar with GitHub, advised:
 
-[![GitHub forks](https://img.shields.io/github/forks/jamesbrandscience/Covariation_monophthongs_NZE_2020.svg?style=social&label=Fork&maxAge=2592000)](https://GitHub.com/jamesbrandscience/Covariation_monophthongs_NZE_2020/fork/)
+[![GitHub forks](https://img.shields.io/github/forks/nzilbb/Covariation_monophthongs_NZE_2020.svg?style=social&label=Fork&maxAge=2592000)](https://GitHub.com/nzilbb/Covariation_monophthongs_NZE_2020/fork/)
 
 You can also download individual files using the ![](https://tinyurl.com/yct7xbra) icon (this not advised as most files are dependent on other files to run correctly).
 
@@ -51,13 +51,13 @@ You are reading the `README.md` file.
 
 ### Analysis
 
-- **Covariation_monophthongs_analysis.Rmd** [![](https://tinyurl.com/yct7xbra)](https://raw.githubusercontent.com/jamesbrandscience/Covariation_monophthongs_NZE_2020/master/Analysis/Covariation_monophthongs_analysis.Rmd)
+- **Covariation_monophthongs_analysis.Rmd** [![](https://tinyurl.com/yct7xbra)](https://raw.githubusercontent.com/nzilbb/Covariation_monophthongs_NZE_2020/master/Analysis/Covariation_monophthongs_analysis.Rmd)
 
 	- R Markdown document containing all the code that is required to reproduce the analyses reported in the paper
 	- This file is to be used in RStudio
 	- It requires the `data` folder to work
-	
-- **Covariation_monophthongs_filtering_anon.html** [![](https://tinyurl.com/yct7xbra)](https://jamesbrandscience.github.io/Covariation_monophthongs_NZE_2020/Analysis/Covariation_monophthongs_analysis.html)
+
+- **Covariation_monophthongs_filtering_anon.html** [![](https://tinyurl.com/yct7xbra)](https://nzilbb.github.io/Covariation_monophthongs_NZE_2020/Analysis/Covariation_monophthongs_analysis.html)
 
 	- HTML output of the data filtering file (`Covariation_monophthongs_filtering_anon.Rmd`)
 	- This is used as a web accessible version to show the workflow of the data filtering (accessible [[here]](LINK))
@@ -69,14 +69,14 @@ You are reading the `README.md` file.
 	- These are in `.png` format and are used as an external source for the images in the `.html` output
 	- Created to reduce the size of the `Covariation_monophthongs_analysis.html` file
 
-- **Covariation_monophthongs_filtering_anon.Rmd** [![](https://tinyurl.com/yct7xbra)](https://raw.githubusercontent.com/jamesbrandscience/Covariation_monophthongs_NZE_2020/master/Analysis/Covariation_monophthongs_filtering_anon.Rmd)
+- **Covariation_monophthongs_filtering_anon.Rmd** [![](https://tinyurl.com/yct7xbra)](https://raw.githubusercontent.com/nzilbb/Covariation_monophthongs_NZE_2020/master/Analysis/Covariation_monophthongs_filtering_anon.Rmd)
 
 	- R Markdown document containing all the code that was run during the filtering workflow reported in the paper
 	- This file is to be used in RStudio
 	- We do not provide the raw data for this file to run as it contains information about the speakers that we do not wish to make publicly available
 
 
-- **Covariation_monophthongs_analysis.html** [![](https://tinyurl.com/yct7xbra)](https://jamesbrandscience.github.io/Covariation_monophthongs_NZE_2020/Analysis/Covariation_monophthongs_filtering.html)
+- **Covariation_monophthongs_analysis.html** [![](https://tinyurl.com/yct7xbra)](https://nzilbb.github.io/Covariation_monophthongs_NZE_2020/Analysis/Covariation_monophthongs_filtering.html)
 
 	- HTML output of the main analysis file (`Covariation_monophthongs_analysis.Rmd`)
 	- This is used as a web accessible version of the analysis (accessible [[here]](LINK))
@@ -85,9 +85,9 @@ You are reading the `README.md` file.
 
 	- All data files required to run the main analysis file
 	- This contains
-		- The raw data file as a R data object `ONZE_vowels_filtered_anon.rds` [![](https://tinyurl.com/yct7xbra)](https://github.com/jamesbrandscience/Covariation_monophthongs_NZE_2020/raw/master/Analysis/Data/ONZE_vowels_filtered_anon.rds)
-		- The random intercepts for speaker from the GAMMs `gam_intercepts_tmp_new.csv` [![](https://tinyurl.com/yct7xbra)](https://raw.githubusercontent.com/jamesbrandscience/Covariation_monophthongs_NZE_2020/master/Analysis/Data/gam_intercepts_tmp_new.csv)
-		- The random intercepts for speaker from the lmers `lmer_intercepts.csv` [![](https://tinyurl.com/yct7xbra)](https://raw.githubusercontent.com/jamesbrandscience/Covariation_monophthongs_NZE_2020/master/Analysis/Data/lmer_intercepts.csv)
+		- The raw data file as a R data object `ONZE_vowels_filtered_anon.rds` [![](https://tinyurl.com/yct7xbra)](https://github.com/nzilbb/Covariation_monophthongs_NZE_2020/raw/master/Analysis/Data/ONZE_vowels_filtered_anon.rds)
+		- The random intercepts for speaker from the GAMMs `gam_intercepts_tmp_new.csv` [![](https://tinyurl.com/yct7xbra)](https://raw.githubusercontent.com/nzilbb/Covariation_monophthongs_NZE_2020/master/Analysis/Data/gam_intercepts_tmp_new.csv)
+		- The random intercepts for speaker from the lmers `lmer_intercepts.csv` [![](https://tinyurl.com/yct7xbra)](https://raw.githubusercontent.com/nzilbb/Covariation_monophthongs_NZE_2020/master/Analysis/Data/lmer_intercepts.csv)
 	- An additional folder `Models` containing pre-run GAMM outputs
 
 - **Figures**
@@ -99,7 +99,7 @@ You are reading the `README.md` file.
 
 	- These are libraries used for the compilation of the `Covariation_monophthongs_analysis.html` file
 	- Created to reduce the file size
-	
+
 - **Covariation_shiny**
 
 	- All the files that run the shiny web app (accessible [[here]](https://nzilbb.shinyapps.io/Covariation_shiny/))
@@ -108,16 +108,16 @@ You are reading the `README.md` file.
 		- `ONZE_summary.rds` contains speaker summaries per vowel (mean F1/F2, demographics, PC scores) and PC vowel-formant loadings. This is used to generate the PC score and vowel space plots
 		- `mod_pred_data.rds` contains the model predictions from the year of birth GAMMs. This is used for the sound change exploration
 	- The `www` folder contains various images to customise the appearance of the app. There is also `about.md` and `more.md` that create the about and more sections
-	- The `rsconnect` folder is generated when deployed to shinyapps.io	
-	
+	- The `rsconnect` folder is generated when deployed to shinyapps.io
+
 	- You can also run the app locally using the following R code (note you need the `shiny` package installed in R, you can do this by `install.packages("shiny")`):
-	
+
 	```
 	library(shiny)
-	runUrl( "https://jamesbrandscience.github.io/Covariation_monophthongs_NZE_2020/Analysis/Covariation_shiny.zip")
+	runUrl( "https://nzilbb.github.io/Covariation_monophthongs_NZE_2020/Analysis/Covariation_shiny.zip")
 	```
 
-- **Analysis_reduced** [![](https://tinyurl.com/yct7xbra)](https://github.com/jamesbrandscience/Covariation_monophthongs_NZE_2020/raw/master/Analysis/Analysis_reduced.zip)
+- **Analysis_reduced** [![](https://tinyurl.com/yct7xbra)](https://github.com/nzilbb/Covariation_monophthongs_NZE_2020/raw/master/Analysis/Analysis_reduced.zip)
 
 	- A slimline `.zip` folder for download purposes, it contains all the main analysis files
 
@@ -132,6 +132,3 @@ You are reading the `README.md` file.
 - **references.bib**
 
 - **Cover_letter_JPhon**
-
-
-