doc: fix deprecation documentation inconsistencies

doc/api/domain.md

@@ -1,5 +1,6 @@
 # Domain
 <!-- YAML
+deprecated: v1.4.2
 changes:
   - version: v8.8.0
     description: Any `Promise`s created in VM contexts no longer have a

doc/api/events.md

@@ -305,7 +305,7 @@ The `'removeListener'` event is emitted *after* the `listener` is removed.
 ### `EventEmitter.listenerCount(emitter, eventName)`
 <!-- YAML
 added: v0.9.12
-deprecated: v4.0.0
+deprecated: v3.2.0
 -->
 
 > Stability: 0 - Deprecated: Use [`emitter.listenerCount()`][] instead.

doc/api/fs.md

@@ -2403,6 +2403,8 @@ changes:
     pr-url: https://github.com/nodejs/node/pull/7897
     description: The `callback` parameter is no longer optional. Not passing
                  it will emit a deprecation warning with id DEP0013.
+  - version: v0.4.7
+    description: Documentation-only deprecation.
 -->
 
 * `path` {string|Buffer|URL}
@@ -2420,6 +2422,8 @@ changes:
   - version: v10.6.0
     pr-url: https://github.com/nodejs/node/pull/21498
     description: This API is no longer deprecated.
+  - version: v0.4.7
+    description: Documentation-only deprecation.
 -->
 
 * `path` {string|Buffer|URL}

doc/api/punycode.md

@@ -1,9 +1,6 @@
 # Punycode
 <!-- YAML
-changes:
-  - version: v7.0.0
-    pr-url: https://github.com/nodejs/node/pull/7941
-    description: Accessing this module will now emit a deprecation warning.
+deprecated: v7.0.0
 -->
 
 <!--introduced_in=v0.10.0-->