ENH: Serialize+parallelize 4D `apply()` into 3D+t and add 'low memory' loading#215

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oesteban merged 24 commits intomasterfrom

enh/reenable-parallelization-apply-214

Aug 10, 2024

Commits on Jul 23, 2024

wip: initiate implementation
oesteban
committed

Commits on Jul 24, 2024

enh: draft implementation of serialize 4d

Julien Marabotto
authored and
Julien Marabotto
committed

Commits on Jul 25, 2024

fix: passes more tests, more suggestions in progress

Julien Marabotto
authored and
Julien Marabotto
committed
fix: pass tests

Julien Marabotto
authored and
Julien Marabotto
committed
fix: pass tests, serialization implemented

Julien Marabotto
authored and
Julien Marabotto
committed

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ENH: Serialize+parallelize 4D `apply()` into 3D+t and add 'low memory' loading#215

ENH: Serialize+parallelize 4D ``apply()`` into 3D+t and add 'low memory' loading#215
oesteban merged 24 commits intomasterfrom
enh/reenable-parallelization-apply-214

Commits on Jul 23, 2024

wip: initiate implementation

Commits on Jul 24, 2024

enh: draft implementation of serialize 4d

Commits on Jul 25, 2024

fix: passes more tests, more suggestions in progress

fix: pass tests

fix: pass tests, serialization implemented

Commits on Jul 29, 2024

wip: initiate implementation

Merge remote-tracking branch 'jmarabotto/patch/oesteban-pr' into enh/reenable-parallelization-apply-214

Commits on Jul 30, 2024

enh: integrating @jmarabotto's code

fix: ensure output dtype when resampling

fix: resolve some failing tests

Commits on Jul 31, 2024

fix: ensure ``len`` is defined for all transforms``

fix: clarify what is a 3D transform chain and a 4D transform

maint: reorganize tests around the spun-off apply

sty: format changed files

Merge remote-tracking branch 'upstream/master' into enh/reenable-parallelization-apply-214

Commits on Aug 1, 2024

enh: expand test coverage

enh: prepare code for easy parallelization with a process pool executor

enh: create process pool

Merge pull request #220 from nipy/enh/reenable-parallelization-apply-214-parallel

enh: expand test coverage

Commits on Aug 2, 2024

sty: add type annotations

enh: implement a memory limitation mechanism in loading data

Merge pull request #221 from nipy/enh/reenable-parallelization-apply-214-dtypes

Commits on Aug 6, 2024

enh: port from process pool into asyncio concurrent

ENH: Serialize+parallelize 4D ``apply()`` into 3D+t and add 'low memory' loading#215oesteban merged 24 commits intomasternipy/nitransforms:masterfrom enh/reenable-parallelization-apply-214nipy/nitransforms:enh/reenable-parallelization-apply-214Copy head branch name to clipboard

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Commits on Jul 24, 2024

Commits on Jul 25, 2024

Commits on Jul 29, 2024

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Commits on Jul 31, 2024

Commits on Aug 1, 2024

Commits on Aug 2, 2024

Commits on Aug 6, 2024

ENH: Serialize+parallelize 4D ``apply()`` into 3D+t and add 'low memory' loading#215
oesteban merged 24 commits intomasterfrom
enh/reenable-parallelization-apply-214