[ENH]: Add AFNI 3dDeconvolve/3dREMLfit interfaces #2095
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Added outline of classes for AFNI's 3dDeconvolve (inputspec, outputspec, and command). Nothing is there yet, but it's something to build off of.
Added options to Deconvolve InputSpec, updated __init__.py with Deconvolve, and fixed doctests.
Added auto_test files from make spec for AFNI interface model.py
Beefed up AFNICommand Base to include _gen_fname() method (lifted from FSLCommand Base class). Minor bug edits in Deconvolve cmdline code.
Issue with single quotes around Deconvolve doctest
Forgot to re-run make spec after Deconvolve doctest update
Codecov Report
@@ Coverage Diff @@
## master #2095 +/- ##
==========================================
- Coverage 72.14% 72.14% -0.01%
==========================================
Files 1139 1142 +3
Lines 57310 57448 +138
Branches 8215 8235 +20
==========================================
+ Hits 41344 41443 +99
- Misses 14673 14706 +33
- Partials 1293 1299 +6
Continue to review full report at Codecov.
|
Codecov Report
@@ Coverage Diff @@
## master #2095 +/- ##
==========================================
- Coverage 72.14% 72.14% -0.01%
==========================================
Files 1139 1142 +3
Lines 57310 57448 +138
Branches 8215 8235 +20
==========================================
+ Hits 41344 41443 +99
- Misses 14673 14706 +33
- Partials 1293 1299 +6
Continue to review full report at Codecov.
|
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