enh: update openfmri workflow to link with freesurfer output other cleanups #1037
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satra
commented
Jan 31, 2015
satra
commented
- optional support for using freesurfer registration
- and for that segment allows specifying ants registration target.
- datasink now includes various files for quality assessment
- TSNR per ROI (with freesurfer only)
- motion and art detection output
- anatomical to target registration
- datasink output directory structure streamlined
* upstream/master: Updated CHANGES file FIX fix split_filename behaviour when path has no filename TST correct fail case in test_filemanip:test_split_filename TST: add fail case in test_filemanip:test_split_filename Updated CHANGES file Updated test for FSL DTIFit Added option to correct for gradient non linearities in dtifit CHANGES file updated to include Camino tracking updates Test overlap not included before Update to Camino tracking interfaces Fix conflicts delete line instead comment out update CHANGES make specs fix KeyError when using redirect_x in CommandLineInterface
* upstream/master: STYLE: modified CHANGES ENH: ANTs JointFusion with nosetests
satra
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Feb 8, 2015
enh: update openfmri workflow to link with freesurfer output other cleanups
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