Closed
Description
It seems afni_vcheck
will run at least once somehow during creating a single subject pipeline, which can be really annoying when https://afni.nimh.nih.gov/pub/dist/AFNI.version
doesn't response. In my case, the whole computing cluster waited for hours before any real job started running. This version check is unnecessary for containers, because the AFNI version is already specified in the Dockerfile, and we don't expect to upgrade AFNI during running fmriprep
even if a newer version is available.
I removed /usr/lib/afni/bin/afni_vcheck
in my image and that fixed this problem (with an additional warning though).