RuntimeError: No BOLD images found for participant <001> and task <all>

[Hyedryn]

Hi,

I have tried to process a BIDS dataset with 2 sessions of T1w, bold and fieldmap images. Unfortunately, the pipeline fails when trying to extract subject data.

What version of fMRIPrep are you using?

Commit d153551 of fmriprep-rodents.

What kind of installation are you using? Containers (Singularity, Docker), or "bare-metal"?

bare-metal

What is the exact command-line you used?

fprodents <myBIDSPath> <myDerivativesPath> participant 

Have you checked that your inputs are BIDS valid?

Yes

fMRIPrep rodents Logs

Traceback (most recent call last):
  File "/opt/sw/arch/easybuild/2020b/software/Python/3.8.6-GCCcore-10.2.0/lib/python3.8/multiprocessing/pro                                  cess.py", line 315, in _bootstrap
    self.run()
  File "/opt/sw/arch/easybuild/2020b/software/Python/3.8.6-GCCcore-10.2.0/lib/python3.8/multiprocessing/pro                                  cess.py", line 108, in run
    self._target(*self._args, **self._kwargs)
  File "/home/ucl/elen/qdessain/.local/lib/python3.8/site-packages/fprodents/cli/workflow.py", line 81, in                                   build_workflow
    retval["workflow"] = init_fmriprep_wf()
  File "/home/ucl/elen/qdessain/.local/lib/python3.8/site-packages/fprodents/workflows/base.py", line 50, i                                  n init_fmriprep_wf
    single_subject_wf = init_single_subject_wf(subject_id)
  File "/home/ucl/elen/qdessain/.local/lib/python3.8/site-packages/fprodents/workflows/base.py", line 152,                                   in init_single_subject_wf
    raise RuntimeError(
RuntimeError: No BOLD images found for participant <001> and task <all>. All workflows require BOLD images