build-configs: Use hyphens for directories

nextstrain · Jan 26, 2024 · 4043f03 · 4043f03
1 parent 534751a
commit 4043f03
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Showing 6 changed files with 4 additions and 4 deletions.
diff --git a/ingest/README.md b/ingest/README.md
@@ -39,7 +39,7 @@ in the main Snakefile in the order that they are expected to run.
 The build-configs directory contains custom configs and rules that override and/or
 extend the default workflow.
 
-- [nextstrain_automation](build-configs/nextstrain_automation/) - automated internal Nextstrain builds.
+- [nextstrain-automation](build-configs/nextstrain-automation/) - automated internal Nextstrain builds.
 
 
 ## Vendored

diff --git a/...configs/nextstrain_automation/config.yaml → ...configs/nextstrain-automation/config.yaml b/...configs/nextstrain_automation/config.yaml → ...configs/nextstrain-automation/config.yaml
@@ -4,7 +4,7 @@
 # Custom rules to run as part of the Nextstrain automated workflow
 # The paths should be relative to the ingest directory.
 custom_rules:
-  - build-configs/nextstrain_automation/upload.smk
+  - build-configs/nextstrain-automation/upload.smk
 
 # Nextstrain CloudFront domain to ensure that we invalidate CloudFront after the S3 uploads
 # This is required as long as we are using the AWS CLI for uploads

diff --git a/...-configs/nextstrain_automation/upload.smk → ...-configs/nextstrain-automation/upload.smk b/...-configs/nextstrain_automation/upload.smk → ...-configs/nextstrain-automation/upload.smk
diff --git a/nextclade/README.md b/nextclade/README.md
@@ -26,4 +26,4 @@ in the main Snakefile in the order that they are expected to run.
 The build-configs directory contains custom configs and rules that override and/or
 extend the default workflow.
 
-- [test_dataset](build-configs/test_dataset/) - build to test new Nextclade dataset
+- [test-dataset](build-configs/test-dataset/) - build to test new Nextclade dataset
diff --git a/...de/build-configs/test_dataset/config.yaml → ...de/build-configs/test-dataset/config.yaml b/...de/build-configs/test_dataset/config.yaml → ...de/build-configs/test-dataset/config.yaml
@@ -4,4 +4,4 @@
 # Custom rules to run as part of the testing workflow
 # The paths should be relative to the phylogenetic directory.
 custom_rules:
-  - build-configs/test_dataset/test_dataset.smk
+  - build-configs/test-dataset/test_dataset.smk
diff --git a/...ild-configs/test_dataset/test_dataset.smk → ...ild-configs/test-dataset/test_dataset.smk b/...ild-configs/test_dataset/test_dataset.smk → ...ild-configs/test-dataset/test_dataset.smk