chore(deps): bump actions/checkout from 3 to 4

Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](actions/checkout@v3...v4)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>

.github/workflows/bioconda.yml

@@ -35,7 +35,7 @@ jobs:
 
     steps:
       - name: "Checkout code"
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 1
           submodules: true

.github/workflows/builder-docker-image.yml

@@ -29,7 +29,7 @@ jobs:
 
     steps:
       - name: "Checkout code"
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 1
           submodules: true

.github/workflows/cli.yml

@@ -70,7 +70,7 @@ jobs:
           echo "DATA_FULL_DOMAIN=https://data.master.clades.nextstrain.org/v3" >> $GITHUB_ENV
 
       - name: "Checkout code"
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 1
           submodules: true
@@ -149,7 +149,7 @@ jobs:
 
     steps:
       - name: "Checkout code"
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 1
           submodules: true
@@ -195,7 +195,7 @@ jobs:
 
     steps:
       - name: "Checkout code"
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 1
           submodules: true
@@ -241,7 +241,7 @@ jobs:
 
     steps:
       - name: "Checkout code"
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 1
           submodules: true
@@ -270,7 +270,7 @@ jobs:
   #
   #    steps:
   #      - name: "Checkout code"
-  #        uses: actions/checkout@v3
+  #        uses: actions/checkout@v4
   #        with:
   #          fetch-depth: 1
   #          submodules: true
@@ -294,7 +294,7 @@ jobs:
 
     steps:
       - name: "Checkout code"
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 1
           submodules: true
@@ -318,7 +318,7 @@ jobs:
 
     steps:
       - name: "Checkout code"
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 1
           submodules: true
@@ -346,7 +346,7 @@ jobs:
 
     steps:
       - name: "Checkout code"
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 1
           submodules: true
@@ -382,7 +382,7 @@ jobs:
 
     steps:
       - name: "Checkout code"
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 1
           submodules: true

.github/workflows/web.yml

@@ -57,7 +57,7 @@ jobs:
           echo "PLAUSIBLE_IO_DOMAIN=master.clades.nextstrain.org" >> $GITHUB_ENV
 
       - name: "Checkout code"
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 1
           submodules: true
@@ -182,7 +182,7 @@ jobs:
           echo "AWS_S3_BUCKET=${{ secrets.MASTER_AWS_S3_BUCKET }}" >> $GITHUB_ENV
 
       - name: "Checkout code"
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 1
           submodules: true