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Issues list

[ancestral] reference seq may be reference or inferred tree root bug Something isn't working priority: low To be resolved after high and moderate priority issues
#1362 opened Dec 18, 2023 by jameshadfield
2
Numpy deprecation warnings for pandas imports priority: low To be resolved after high and moderate priority issues
#1316 opened Sep 15, 2023 by corneliusroemer
Frequency estimation fails with missing data. bug Something isn't working priority: low To be resolved after high and moderate priority issues
#582 opened Jun 27, 2020 by rneher
1
How to have more control over the contents of the maintainers section? enhancement New feature or request priority: low To be resolved after high and moderate priority issues
#515 opened Apr 3, 2020 by terrycojones
3
[BUG] augur mask only supports VCFs with a single "chromosome" entry bug Something isn't working moderate problem Requires an average amount of work priority: low To be resolved after high and moderate priority issues
#507 opened Mar 31, 2020 by huddlej
8
Feature request: Command to convert .json to .nwk enhancement New feature or request priority: low To be resolved after high and moderate priority issues
#438 opened Feb 3, 2020 by mvolz
8
Make Sequence Traits work with Fasta Input enhancement New feature or request moderate problem Requires an average amount of work priority: low To be resolved after high and moderate priority issues
#415 opened Nov 21, 2019 by emmahodcroft
augur export prefers num_date over numdate exported by augur refine bug Something isn't working easy problem Requires less work than most issues priority: low To be resolved after high and moderate priority issues
#215 opened Sep 5, 2018 by huddlej
1
5
Frequencies JSON spec breaking Makes a backwards incompatible change and should wait for major release enhancement New feature or request moderate problem Requires an average amount of work priority: low To be resolved after high and moderate priority issues
#84 opened Feb 22, 2018 by trvrb
@huddlej @jameshadfield
@rneher @sidneymbell
6
Store titer records in TiterRecord class and export in structured JSON format easy problem Requires less work than most issues enhancement New feature or request priority: low To be resolved after high and moderate priority issues
#35 opened Jul 20, 2017 by huddlej
@huddlej
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