Update changelog

Lots of changes in this PR, but only a couple are user-facing. All other
changes can be considered performance improvements that do not change
functionality.

CHANGES.md

@@ -2,18 +2,29 @@
 
 ## __NEXT__
 
+### Features
+
+* filter: Add a new argument `--query-columns` allowing users to explicitly specify columns and data types for when automatic type inference behaves unexpectedly. [#1294][] (@victorlin)
+
+### Bug fixes
+
+* filter: The order of rows in `--output-metadata` and `--output-strains` now reflects the order in the original `--metadata`. [#1290][] (@victorlin)
+
+[#1294]: https://github.com/nextstrain/augur/pull/1294
 
 ## 22.4.0 (29 August 2023)
 
 ### Features
 
 * refine: Export covariance matrix and standard deviation for clock rate regression in the node data JSON output when these values are calculated by TreeTime. These new values appear in the `clock` data structure of the JSON output as `cov` and `rate_std` keys, respectively. [#1284][] (@huddlej)
+* filter: Add a new argument `--query-columns` allowing users to explicitly specify columns and data types for when automatic type inference behaves unexpectedly. [#1294][] (@victorlin)
 
 ### Bug fixes
 
 * clades: Fix outputs for genes named `NA` (previously the value was replaced by `nan`). [#1293][] (@rneher)
 * distance: Improve documentation by describing how gaps get treated as indels and how users can ignore specific characters in distance calculations. [#1285][] (@huddlej)
 * Fix help output compatibility with non-Unicode streams. [#1290][] (@victorlin)
+* filter: The order of rows in `--output-metadata` and `--output-strains` now reflects the order in the original `--metadata`. [#1290][] (@victorlin)
 
 [#1284]: https://github.com/nextstrain/augur/pull/1284
 [#1285]: https://github.com/nextstrain/augur/pull/1285