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Summary
The nilearn masker objects have memory
and memory_level
parameters. I don't have much experience with them, but I think they could be used as an alternative to our safe_transform
function (added in #520).
Additional details
Hopefully, this would reduce NiMARE's burden and simplify our code. I'm also hoping that nilearn
's approach would handle large arrays more easily than our own.
Next steps
- On a branch, replace
safe_transform
with simpleMasker.transform
calls, but initialize or set params in the maskers to use the memory parameters. - Memory profile our current code against the branch's approach.
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