Skip to content

Releases: ncats/pharos_frontend

Pharos v3.8

23 Aug 14:33
Compare
Choose a tag to compare

3.8.0 (2021-09-01)

Added Features

  • AlphaFold Structures
    • Structures from DeepMind and EMBL-EBI are shown alongside experimentally determined structures;
    • The Protein Structure Panel has some other improvements, such as the added ability to change the representation, and coloring, of the structures.
    • The table also shows some relevant details of the experimental structures, like the residues included in the structure, and the fraction of the total protein in the structure.
  • Expression Panel Improvements
    • The Expression Panel has been simplified and improved to show a heatmap of tissues and data sources.
    • GTEx data is now included along with the other data sources.
  • Tutorials
    • There are several tutorials to walk people through the new features of Pharos, or some of the lesser known features
    • Chemical structure search, the UpSet Charts, Uploading Custom Target Lists, etc. See the main menu item "Tutorials" to access them.

Bug Fixes / Miscellaneous updates

  • Structure Search now parses input from many different formats
  • Filter visualizations on the list pages show either a Donut Chart, or an UpSet Chart. Previously there were tabs to show both of them.

Pharos v3.6.0

28 Apr 12:38
df2ff74
Compare
Choose a tag to compare

3.6.0 (2020-05-01)

Added Features

  • TIGA Data Visualizations

    • Genome-wide association studies (GWAS) find associations between phenotypic traits and genes. Target Illumination GWAS Analytics (TIGA) scores and ranks those traits according to the a subset of the study parameters.
    • From target details pages, you'll see plots and tables of associated GWAS phenotypes, ranked according to the number and quality of GWAS studies involved.
    • From disease details pages, you'll see plots and tables of associated targets, ranked accordingly as well.
  • Ligand Details pages for Drugs include UNIIs

  • Link out to GlyGen from target details pages

  • Updated Frequently Asked Questions

  • Updated database to TCRD 6.11.0

Bug Fixes / Miscellaneous updates

  • major version upgrade for d3 (6.6.2)
  • DRGC data (IDG Resources) are fetched from TCRD now, rather than the API
  • Harmonizome data sources previously wouldn't show up, the problem is fixed.
  • DTO classes weren't showing up, now they do, the problem is fixed.