Releases: ncats/pharos_frontend
Releases · ncats/pharos_frontend
Pharos v3.8
3.8.0 (2021-09-01)
Added Features
- AlphaFold Structures
- Structures from DeepMind and EMBL-EBI are shown alongside experimentally determined structures;
- The Protein Structure Panel has some other improvements, such as the added ability to change the representation, and coloring, of the structures.
- The table also shows some relevant details of the experimental structures, like the residues included in the structure, and the fraction of the total protein in the structure.
- Expression Panel Improvements
- The Expression Panel has been simplified and improved to show a heatmap of tissues and data sources.
- GTEx data is now included along with the other data sources.
- Tutorials
- There are several tutorials to walk people through the new features of Pharos, or some of the lesser known features
- Chemical structure search, the UpSet Charts, Uploading Custom Target Lists, etc. See the main menu item "Tutorials" to access them.
Bug Fixes / Miscellaneous updates
- Structure Search now parses input from many different formats
- Filter visualizations on the list pages show either a Donut Chart, or an UpSet Chart. Previously there were tabs to show both of them.
Pharos v3.6.0
3.6.0 (2020-05-01)
Added Features
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TIGA Data Visualizations
- Genome-wide association studies (GWAS) find associations between phenotypic traits and genes. Target Illumination GWAS Analytics (TIGA) scores and ranks those traits according to the a subset of the study parameters.
- From target details pages, you'll see plots and tables of associated GWAS phenotypes, ranked according to the number and quality of GWAS studies involved.
- From disease details pages, you'll see plots and tables of associated targets, ranked accordingly as well.
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Ligand Details pages for Drugs include UNIIs
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Link out to GlyGen from target details pages
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Updated Frequently Asked Questions
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Updated database to TCRD 6.11.0
Bug Fixes / Miscellaneous updates
- major version upgrade for d3 (6.6.2)
- DRGC data (IDG Resources) are fetched from TCRD now, rather than the API
- Harmonizome data sources previously wouldn't show up, the problem is fixed.
- DTO classes weren't showing up, now they do, the problem is fixed.