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Merged
merged 7 commits into from
Sep 22, 2016
Merged

add conda-build, docs, cli #46

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9e5e5af
add devtools
Sep 1, 2016
ed69685
add docs
Sep 3, 2016
c284720
cli
Sep 18, 2016
9e30f09
improve tests
Sep 18, 2016
63441b1
knn default
Sep 18, 2016
92a648c
misc changes
Sep 22, 2016
e64a348
Doane's Rule
Sep 22, 2016
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45 changes: 31 additions & 14 deletions .travis.yml
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Original file line number Diff line number Diff line change
@@ -1,21 +1,38 @@
language: python
language: c
sudo: false

before_install:
- sudo apt-get update
- wget http://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;
- bash miniconda.sh -b -p $HOME/miniconda
- export PATH="$HOME/miniconda/bin:$PATH"
- hash -r
- conda config --set always_yes yes --set changeps1 no
- conda update -q conda
- conda install numpy scipy pandas scikit-learn nose
- conda install -c omnia mdtraj msmbuilder nose-timer
env:
matrix:
- CONDA_PY=3.4
- CONDA_PY=3.5

branches:
only:
- master

install:
- python setup.py install
- source devtools/travis-ci/install_miniconda.sh
- conda config --add channels omnia
- conda install -yq python-coveralls

script:
- nosetests -v --with-timer
- conda build --quiet devtools/conda-recipe &&
devtools/travis-ci/build_docs.sh

after_success:
- echo 'after_success'
- cp $HOME/miniconda3/conda-bld/test-tmp_dir/.coverage .
- coveralls

deploy:
- provider: s3
bucket: msmbuilder.org
upload-dir: mdentropy
skip_cleanup: true
local-dir: docs/_deploy/
on:
branch: master
condition: "$CONDA_PY = 3.5"
region: us-east-1
detect_encoding: true
access_key_id: $AWS_ACCESS_KEY
secret_access_key: $AWS_SECRET_KEY
695 changes: 21 additions & 674 deletions LICENSE
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2 changes: 0 additions & 2 deletions MANIFEST.in
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2 changes: 2 additions & 0 deletions README.md
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@@ -1,6 +1,8 @@
[![Build Status](https://travis-ci.org/msmbuilder/mdentropy.svg?branch=master)](https://travis-ci.org/msmbuilder/mdentropy)
[![Code Health](https://landscape.io/github/msmbuilder/mdentropy/master/landscape.svg?style=flat)](https://landscape.io/github/msmbuilder/mdentropy/master)
[![PyPI version](https://badge.fury.io/py/mdentropy.svg)](http://badge.fury.io/py/mdentropy)
[![License](https://img.shields.io/badge/license-MIT-red.svg?style=flat)] (https://opensource.org/licenses/MIT)
[![Documentation](https://img.shields.io/badge/docs-latest-blue.svg?style=flat)] (http://msmbuilder.org/mdentropy/)
[![DOI](https://zenodo.org/badge/doi/10.5281/zenodo.18859.svg)](http://dx.doi.org/10.5281/zenodo.18859)
MDEntropy
=========
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