Update monarch-py to latest, download and populate phenio.db term_association table with phenotype associations #794
Workflow file for this run
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# Builds and runs pytest on ubuntu-latest | |
# Tests python versions >=3.10 | |
name: CI | |
on: | |
push: | |
branches: [ main ] | |
pull_request: | |
branches: [ main ] | |
workflow_dispatch: | |
jobs: | |
test-python3-ubuntu-latest: | |
name: test py${{ matrix.python-version }} on linux | |
runs-on: ubuntu-latest | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: ['3.10', '3.11'] | |
env: | |
PYTHON: ${{ matrix.python-version }} | |
OS: ubuntu | |
steps: | |
- uses: actions/checkout@v3 | |
- name: set up python | |
uses: actions/setup-python@v3 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: make test | |
run: | | |
pip install poetry | |
make test |