TEST-#7166: Fix HDF tests in CI (#7167)

Signed-off-by: Anatoly Myachev <anatoly.myachev@intel.com>
modin-project · Apr 11, 2024 · 975b32c · 975b32c
1 parent 717a328
commit 975b32c
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diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -676,6 +676,8 @@ jobs:
       - uses: ./.github/actions/mamba-env
         with:
           environment-file: environment-dev.yml
+      - name: Install HDF5
+        run: sudo apt update && sudo apt install -y libhdf5-dev
       - run: python -m pytest -n 2 modin/tests/pandas/dataframe/test_map_metadata.py
       - run: python -m pytest -n 2 modin/tests/pandas/test_series.py
       # Do not add parallelism (`-n` argument) here - it will cause mock S3 service to fail.

diff --git a/environment-dev.yml b/environment-dev.yml
@@ -31,6 +31,7 @@ dependencies:
   - sqlalchemy>=2.0.0
   - pandas-gbq>=0.19.0
   - pytables>=3.8.0
+  - c-blosc2<=2.14.1
   # pymssql==2.2.8 broken: https://github.com/modin-project/modin/issues/6429
   - pymssql>=2.1.5,!=2.2.8
   - psycopg2>=2.9.6

diff --git a/requirements/env_hdk.yml b/requirements/env_hdk.yml
@@ -21,6 +21,7 @@ dependencies:
   - matplotlib>=3.6.3
   - xarray>=2022.12.0
   - pytables>=3.8.0
+  - c-blosc2<=2.14.1
   - fastparquet>=2022.12.0
   # pandas isn't compatible with numexpr=2.8.5: https://github.com/modin-project/modin/issues/6469
   - numexpr<2.8.5

diff --git a/requirements/env_unidist_linux.yml b/requirements/env_unidist_linux.yml
@@ -26,6 +26,7 @@ dependencies:
   - sqlalchemy>=2.0.0
   - pandas-gbq>=0.19.0
   - pytables>=3.8.0
+  - c-blosc2<=2.14.1
   # pymssql==2.2.8 broken: https://github.com/modin-project/modin/issues/6429
   - pymssql>=2.1.5,!=2.2.8
   - psycopg2>=2.9.6

diff --git a/requirements/env_unidist_win.yml b/requirements/env_unidist_win.yml
@@ -26,6 +26,7 @@ dependencies:
   - sqlalchemy>=2.0.0
   - pandas-gbq>=0.19.0
   - pytables>=3.8.0
+  - c-blosc2<=2.14.1
   # pymssql==2.2.8 broken: https://github.com/modin-project/modin/issues/6429
   - pymssql>=2.1.5,!=2.2.8
   - psycopg2>=2.9.6

diff --git a/requirements/requirements-no-engine.yml b/requirements/requirements-no-engine.yml
@@ -23,6 +23,7 @@ dependencies:
   - sqlalchemy>=2.0.0
   - pandas-gbq>=0.19.0
   - pytables>=3.8.0
+  - c-blosc2<=2.14.1
   - tqdm>=4.60.0
   # pandas isn't compatible with numexpr=2.8.5: https://github.com/modin-project/modin/issues/6469
   - numexpr<2.8.5