Release 3.6.0 #2099
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Release 3.6.0 #2099
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Post release 3.5.0 reset
* list pandas dependency * minor phrasing updates * interactive get-modflow
* previously erroneously added ".shp" to caller-provided shapefile names * raise error if features is not a filename or list of geometries * correct/expand docstring * add test case
* allow specifying features by shapefile filename (str) or pathlike * resolve shapefiles paths relative to workspace in gridgen config * remove unneeded shutil import from gridgen notebook * use ValueError instead of Exception where appropriate
…with cellids (#2029) * fix(subpackages): fixed detection issue of subpackages in some filein records * fix(recarray cellid): fixed problem when setting data with a recarray with layer/row/column fields (instead of cellid tuple) * fix * fix
* reset mfarray value for idomain to constant 1 if idomain is unspecified
* feat(set all data external options): parameters added "binary" and "base_name" parameters added to set_all_data_external * feat(set all external binary): doc update * feat(set all ext options)
…dels (#1753) * to_coords() and to_prt() methods on particle data classes * to_[mp7/prt]_[pathlines/endpoints]() conversion functions * support plotting PRT pathlines in map/cross-section plots * add basic tests for flopy.utils.geometry.point_in_polygon * remove duplicate/parallel verts from voronoi grids (courtesy aprovost-usgs) * work in progress, will evolve as mf6 PRT is developed
* fix broken links * link to RTD instead of github where possible * consistently link to latest ReadTheDocs (previously mixed stable/latest)
* add methods to read gridgen files * change back local imports * isort * fix black and typo * use os.path.join instead of pathlib * fix some more typos * close #2059
…float sizes (32-bit vs 64-bit) (#2062) * fix(data storage): added numpy type check for consistent integer and float sizes * fix(numpy type check)
* fix tab title to FloPy -- FloPy <version> documentation * remove link to empty/broken search page from main.rst * update version in main.rst to 6.5.0.dev0 * update copyright year in conf.py to 2024
* workaround nbconvert / nbsphinx error affecting pdf build
* fix(tri2vor): remove invalid geometries from voronoi nodes * remove zero length, one vertex (point), and two vertex (line) geometries from list of nodes * linting
…2063) * update(GeoSpatialCollection): add support for geopandas GeoDataFrame objects * update test_geospatial_util.py to include GeoDataFrame tests * add geopandas as optional dependency * linting * * Added geo_dataframe property to grid objects * Added convert_grid method to grid objects * linting * add ignore_holes flag to add_polygon
* move `tri_mask` kwarg to parameters * update docstrings for `tri_mask` kwarg * re-lint with new version of black (v24.1.1) * pin pytest < 8.0.0 (temporarily)
* remove pytest-cases from testing dependencies * refactor mp6 tests without pytest-cases * refactor grid tests without pytest-cases * mark tests requiring geopandas * add .DS_Store to .gitignore
* pandas already requires python-dateutil >= 2.8.2 * remove from pyproject.toml and environment.yml
* update(_plot_package_helper): pass kwargs to datatype helpers * change model_grid kwarg to modelgrid in _plot_model_helper * linting
* fix(tri2vor): remove invalid geometries from voronoi nodes * remove zero length, one vertex (point), and two vertex (line) geometries from list of nodes * linting * update(CsvFile, MF6Output) * update CsvFile to increment duplicate headers * added human readable __repr__ to MF6Output class --------- Co-authored-by: jlarsen <jlarsen@usgs.gov>
* update(_plot_package_helper): pass kwargs to datatype helpers * change model_grid kwarg to modelgrid in _plot_model_helper * linting * update(convert_grid): added crs and offset information to the conversion * remove crs passing from convert_grid
* where previously showing output only on success, assert success and show output on failure * simplify flopy imports (just assume it's present) * consolidate test005_advgw_tidal subdirectories * rename lak1b_bath.txt -> l1b2k_bath.txt * remove unused mf2k_test directory * remove unused mppth/mpend files * improve notebooks section in DEVELOPER.md
* add some explanatory comments to optional.yml * run all non-regression and non-example tests in optional.yml * check for shapely/scipy before creating voronoi grid test cases * fix test_modflow.py::test_pkg_data_containers parametrization
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FloPy 3.6.0
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