Companion code for manuscript:
Matthew Kellom, Maureen Berg, I-Min A. Chen, Ken Chu, Alicia Clum, Marcel Huntemann, Natalia N. Ivanova, Nikos C. Kyrpides, Supratim Mukherjee, T. B. K. Reddy, Simon Roux, Rekha Seshadri, Gitta Szabo, Neha J. Varghese, Tanja Woyke, Emiley A. Eloe-Fadrosh. 2025.
"Tetranucleotide frequencies differentiate genomic boundaries and metabolic strategies across environmental microbiomes"
mSystems 0:e01744-24. DOI: doi.org/10.1128/msystems.01744-24
https://journals.asm.org/doi/10.1128/msystems.01744-24
This repository includes the main script for building the Bokeh tool at microbiomes.jgi.doe.gov. This script is shared for documentation purposes.